RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 NPFFR2Q9Y5X5 522 aa18.82■□□□□ 0.6
SHOX2-203ENST00000441443 A0A0G2JPF8 293 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 HNRNPCL3B7ZW38 293 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 HYAL3O43820 417 aaPredicted RBP18.81■□□□□ 0.6
SHOX2-203ENST00000441443 SC5DO75845 299 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 HNRNPCL4P0DMR1 293 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 METAP1P53582 386 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 ADIPOR2Q86V24 386 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 NUDT13Q86X67 352 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 CACUL1Q86Y37 369 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 GID4Q8IVV7 300 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 KISS1RQ969F8 398 aaPredicted RBP18.81■□□□□ 0.6
SHOX2-203ENST00000441443 MCHR1Q99705 422 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 IFT27Q9BW83 186 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 OR52D1Q9H346 318 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 WASH6PQ9NQA3 447 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 SPHK2Q9NRA0 654 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 MED9Q9NWA0 146 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 ZNF175Q9Y473 711 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 XIRP2A4UGR9 3374 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 A0A1B0GUH1 482 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 AIPO00170 330 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 GALR3O60755 368 aaPredicted RBP18.81■□□□□ 0.6
SHOX2-203ENST00000441443 RHOP08100 348 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 TIMP2P16035 220 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 DHODHQ02127 395 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 PRPF38BQ5VTL8 546 aaKnown RBP18.81■□□□□ 0.6
SHOX2-203ENST00000441443 LILRA6Q6PI73 481 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 SLC44A3Q8N4M1 653 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 FAM98AQ8NCA5 519 aaKnown RBP18.81■□□□□ 0.6
SHOX2-203ENST00000441443 LSM14AQ8ND56 463 aaKnown RBP18.81■□□□□ 0.6
SHOX2-203ENST00000441443 OR1S1Q8NH92 325 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 SLC41A3Q96GZ6 507 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 OR1F2PQ96R84 312 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 SLC38A1Q9H2H9 487 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 FBXL4Q9UKA2 621 aa18.81■□□□□ 0.6
SHOX2-203ENST00000441443 FAM74A7A6NL05 159 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 FLRT2O43155 660 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 TBX19O60806 448 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 PRAF2O60831 178 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 GYPBP06028 91 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 HCCSP53701 268 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 DUSP2Q05923 314 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 FAM74A3Q4VXF1 159 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 TMUB2Q71RG4 321 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 SSX6Q7RTT6 188 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 MACROD1Q9BQ69 325 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 NANSQ9NR45 359 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 SLC7A7Q9UM01 511 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 CHD9Q3L8U1 2897 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 FXYD6-FXYD2A0A087WZ82 144 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 K7ESM1 405 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 DNASE2O00115 360 aaPredicted RBP18.8■□□□□ 0.6
SHOX2-203ENST00000441443 KLF4O43474 513 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 GSTZ1O43708 216 aaPredicted RBP18.8■□□□□ 0.6
SHOX2-203ENST00000441443 FCMRO60667 390 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 KHDRBS3O75525 346 aaKnown RBP18.8■□□□□ 0.6
SHOX2-203ENST00000441443 GIPP09681 153 aaPredicted RBP18.8■□□□□ 0.6
SHOX2-203ENST00000441443 RAB3AP20336 220 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 NOS3P29474 1203 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 CLDN2P57739 230 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 B2MP61769 119 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 AGERQ15109 404 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 GLDNQ6ZMI3 551 aaPredicted RBP18.8■□□□□ 0.6
SHOX2-203ENST00000441443 C17orf64Q86WR6 236 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 RFLNBQ8N5W9 214 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 ARHGDIGQ99819 225 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 FXYD6Q9H0Q3 95 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 SLC35C2Q9NQQ7 365 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 EMC3Q9P0I2 261 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 CXXC1Q9P0U4 656 aaPredicted RBP18.8■□□□□ 0.6
SHOX2-203ENST00000441443 PCDHGA5Q9Y5G8 931 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 COL4A6Q14031 1691 aa18.8■□□□□ 0.6
SHOX2-203ENST00000441443 B3GALNT1O75752 331 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 SAGP10523 405 aaPredicted RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 PRG2P13727 222 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 SEC61A1P61619 476 aaKnown RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 DEFA5Q01523 94 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 DECR1Q16698 335 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 LINC00303Q3SY05 128 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 MBOAT2Q6ZWT7 520 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 GRASPQ7Z6J2 395 aaPredicted RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 UBE3DQ7Z6J8 389 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 CYB561A3Q8NBI2 242 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 LCORQ96JN0 433 aaPredicted RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 ZCCHC4Q9H5U6 513 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 CCDC86Q9H6F5 360 aaKnown RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 HPF1Q9NWY4 346 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 ABRACLQ9P1F3 81 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 FXYD6P3P58550 94 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 TAS2R38P59533 333 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 TGM3Q08188 693 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 ZNF658BQ4V348 819 aaPredicted RBP18.79■□□□□ 0.6
SHOX2-203ENST00000441443 FAM69AQ5T7M9 428 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 FAM71CQ8NEG0 241 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 LMLNQ96KR4 655 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 TEAD3Q99594 435 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 SLC6A15Q9H2J7 730 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 ATPIF1Q9UII2 106 aa18.79■□□□□ 0.6
SHOX2-203ENST00000441443 NDUFS4O43181 175 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms