RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 OR8H1Q8NGG4 311 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 UPRTQ96BW1 309 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 ARSGQ96EG1 525 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 FAM46AQ96IP4 442 aaKnown RBP13.1□□□□□ -0.31
LIMD1-202ENST00000440097 ARHGDIGQ99819 225 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 GALNT9Q9HCQ5 603 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 PRTFDC1Q9NRG1 225 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 RBFOX1Q9NWB1 397 aaKnown RBP13.1□□□□□ -0.31
LIMD1-202ENST00000440097 B3GNT2Q9NY97 397 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 UNC13CQ8NB66 2214 aa13.1□□□□□ -0.31
LIMD1-202ENST00000440097 GXYLT2A0PJZ3 443 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 TLCD2A6NGC4 264 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MYL12BO14950 172 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 FOXS1O43638 330 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 PIAS2O75928 621 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MYL12AP19105 171 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MAOAP21397 527 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 CAV3P56539 151 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 OR1D5P58170 312 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 RRAS2P62070 204 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 POU6F2P78424 691 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 BTG2P78543 158 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 ZNHIT3Q15649 155 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 EIPR1Q53HC9 387 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 CLEC12AQ5QGZ9 265 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 FAM205BPQ63HN1 556 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 TSSK4Q6SA08 328 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 HSDL2Q6YN16 418 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MORN4Q8NDC4 146 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 GPA33Q99795 319 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 EGLN3Q9H6Z9 239 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 DUSP22Q9NRW4 184 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 YARS2Q9Y2Z4 477 aaKnown RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 SEC16AO15027 2179 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 A0A1B0GVT2 93 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 TLX2O43763 284 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 ZNF91Q05481 1191 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MAP4K2Q12851 820 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 COX10Q12887 443 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MLLT11Q13015 90 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MAB21L1Q13394 359 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 ZNF267Q14586 743 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 GINS1Q14691 196 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 NCF4Q15080 339 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MAPK14Q16539 360 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MRPL2Q5T653 305 aaKnown RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MEDAGQ5VYS4 303 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 RANBP3LQ86VV4 465 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 NKAIN4Q8IVV8 208 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 Q8N402 240 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 TEX47Q8TBZ9 253 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 KIAA1143Q96AT1 154 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 SLC41A3Q96GZ6 507 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 DGAT2Q96PD7 388 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 FUZQ9BT04 418 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 ZNF350Q9GZX5 532 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 SPRTNQ9H040 489 aaPredicted RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 GLTPQ9NZD2 209 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 COMMD3Q9UBI1 195 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 SLC7A7Q9UM01 511 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 RNF215Q9Y6U7 377 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 THADAQ6YHU6 1953 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 LRRTM2O43300 516 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 SLC9A3P48764 834 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 DMWDQ09019 674 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MRPL28Q13084 256 aaKnown RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 C1DQ13901 141 aaKnown RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 MZT2BQ6NZ67 158 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 SYT14Q8NB59 555 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 PIGXQ8TBF5 258 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 DIO2Q92813 273 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 ZC3HAV1LQ96H79 300 aaKnown RBP13.09□□□□□ -0.31
LIMD1-202ENST00000440097 TSSK6Q9BXA6 273 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 COQ3Q9NZJ6 369 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 ASPMQ8IZT6 3477 aa13.09□□□□□ -0.31
LIMD1-202ENST00000440097 HRKO00198 91 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 HCN1O60741 890 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 DBIP07108 87 aaKnown RBP13.08□□□□□ -0.32
LIMD1-202ENST00000440097 FAM157BP0CG42 384 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 PRKAR1AP10644 381 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 ARSBP15848 533 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 GPR4P46093 362 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 CLDN20P56880 219 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 RAB25P57735 213 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 SNRPGP62308 76 aaKnown RBP13.08□□□□□ -0.32
LIMD1-202ENST00000440097 DUSP8Q13202 625 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 P2RY14Q15391 338 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 SNAPC1Q16533 368 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 FLYWCH1Q4VC44 716 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 C1orf94Q6P1W5 598 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 TTLL10Q6ZVT0 673 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 PRICKLE2Q7Z3G6 844 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 NRMQ8IXM6 262 aa13.08□□□□□ -0.32
LIMD1-202ENST00000440097 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms