RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 RAD21L1Q9H4I0 556 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 SLC24A3Q9HC58 644 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 EXOSC3Q9NQT5 275 aaKnown RBP21.2■□□□□ 0.98
VARS-217ENST00000440048 ACER3Q9NUN7 267 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 FGFR1OP2Q9NVK5 253 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 THUMPD1Q9NXG2 353 aaKnown RBP21.2■□□□□ 0.98
VARS-217ENST00000440048 KCNN3Q9UGI6 736 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 PACSIN3Q9UKS6 424 aa21.2■□□□□ 0.98
VARS-217ENST00000440048 GJE1A6NN92 205 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 SYNGR4O95473 234 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 DBIP07108 87 aaKnown RBP21.19■□□□□ 0.98
VARS-217ENST00000440048 NUDT7P0C024 238 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 IL7RP16871 459 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 RYKP34925 604 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 CRISP3P54108 245 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 CARD18P57730 90 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 GUCY1A3Q02108 690 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 TLE4Q04727 773 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 SELENBP1Q13228 472 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 TMEM176BQ3YBM2 270 aaPredicted RBP21.19■□□□□ 0.98
VARS-217ENST00000440048 PEX5LQ8IYB4 626 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 TMEM234Q8WY98 164 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 TMEM19Q96HH6 336 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 VAPAQ9P0L0 249 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 MCTS1Q9ULC4 181 aaKnown RBP21.19■□□□□ 0.98
VARS-217ENST00000440048 DSPPQ9NZW4 1301 aa21.19■□□□□ 0.98
VARS-217ENST00000440048 TRBV5-3A0A0A0MS03 114 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 ADAM11O75078 769 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 VIMP08670 466 aaKnown RBP21.18■□□□□ 0.98
VARS-217ENST00000440048 TROVE2P10155 538 aaKnown RBP eCLIP21.18■□□□□ 0.98
VARS-217ENST00000440048 BMP2P12643 396 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 NID1P14543 1247 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 SIRPAP78324 504 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 FADDQ13158 208 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 MYBPHQ13203 477 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 GNA13Q14344 377 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 GUSBP1Q15486 140 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 RPS26P11Q5JNZ5 115 aaPredicted RBP21.18■□□□□ 0.98
VARS-217ENST00000440048 METTL21CQ5VZV1 264 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 PLEKHM3Q6ZWE6 761 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 BTLAQ7Z6A9 289 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 ZNF563Q8TA94 476 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 ZNF559Q9BR84 538 aa21.18■□□□□ 0.98
VARS-217ENST00000440048 RBM24Q9BX46 236 aaKnown RBP21.18■□□□□ 0.98
VARS-217ENST00000440048 DNAJB12Q9NXW2 375 aaKnown RBP21.18■□□□□ 0.98
VARS-217ENST00000440048 SPG11Q96JI7 2443 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 TMEM247A6NEH6 219 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 A8MXE2 369 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 ATP8B1O43520 1251 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 PEX19P40855 299 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 KIR2DL3P43628 341 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 CPA2P48052 419 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 MERTKQ12866 999 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 MRPL2Q5T653 305 aaKnown RBP21.17■□□□□ 0.98
VARS-217ENST00000440048 CGB2Q6NT52 195 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 VRK2Q86Y07 508 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 KIF18BQ86Y91 864 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 OR52P1PQ8NH57 321 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 MAL2Q969L2 176 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 SRXN1Q9BYN0 137 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 CCDC134Q9H6E4 229 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 COQ10BQ9H8M1 238 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 A4GALTQ9NPC4 353 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 GALNT8Q9NY28 637 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 GMEB1Q9Y692 573 aa21.17■□□□□ 0.98
VARS-217ENST00000440048 OTOGQ6ZRI0 2925 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 A0A0G2JPF8 293 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 HNRNPCL2B2RXH8 293 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 HNRNPCL3B7ZW38 293 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 AP3D1O14617 1153 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 MSTNO14793 375 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 HNRNPCL1O60812 293 aaKnown RBP21.16■□□□□ 0.98
VARS-217ENST00000440048 SMNDC1O75940 238 aaKnown RBP eCLIP21.16■□□□□ 0.98
VARS-217ENST00000440048 HNRNPCL4P0DMR1 293 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 PPIBP23284 216 aaKnown RBP21.16■□□□□ 0.98
VARS-217ENST00000440048 SF3A3Q12874 501 aaKnown RBP eCLIP21.16■□□□□ 0.98
VARS-217ENST00000440048 C3orf33Q6P1S2 294 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 DLEU7Q6UYE1 221 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 ROBO4Q8WZ75 1007 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 MCCC2Q9HCC0 563 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 TIGARQ9NQ88 270 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 CRIM1Q9NZV1 1036 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 LEF1Q9UJU2 399 aaPredicted RBP21.16■□□□□ 0.98
VARS-217ENST00000440048 CLEC4AQ9UMR7 237 aa21.16■□□□□ 0.98
VARS-217ENST00000440048 A0A1W2PNR3 127 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 SLC7A1P30825 629 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 IDH2P48735 452 aaKnown RBP21.15■□□□□ 0.98
VARS-217ENST00000440048 ARFIP2P53365 341 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 KRTAP10-9P60411 292 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 SORDQ00796 357 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 ZNF239Q16600 458 aaKnown RBP21.15■□□□□ 0.98
VARS-217ENST00000440048 LIN52Q52LA3 116 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 ZNF836Q6ZNA1 936 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 FAM214BQ7L5A3 538 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 ZZZ3Q8IYH5 903 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 C10orf111Q8N326 155 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 CPNE4Q96A23 557 aaPredicted RBP21.15■□□□□ 0.98
VARS-217ENST00000440048 GMPPAQ96IJ6 420 aaPredicted RBP21.15■□□□□ 0.98
VARS-217ENST00000440048 LURAP1Q96LR2 239 aa21.15■□□□□ 0.98
VARS-217ENST00000440048 CCDC106Q9BWC9 280 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms