RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CREBL2O60519 120 aaPredicted RBP10.9□□□□□ -0.67
SMPD4-209ENST00000439886 CXCL14O95715 111 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 MBP02144 154 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 MT-ND5P03915 603 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 VAMP1P23763 118 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 FPR3P25089 353 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 BTCP35070 178 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 SIM1P81133 766 aaPredicted RBP10.9□□□□□ -0.67
SMPD4-209ENST00000439886 IL17RCQ8NAC3 791 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 ZDHHC1Q8WTX9 485 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 GHSRQ92847 366 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 C10orf90Q96M02 699 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 MYNNQ9NPC7 610 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 C14orf105Q9NVL8 296 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 GPR160Q9UJ42 338 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 SLC25A13Q9UJS0 675 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 KCND3Q9UK17 655 aa10.9□□□□□ -0.67
SMPD4-209ENST00000439886 KRBOX1C9JBD0 128 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 GOSR2O14653 212 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 GPR37O15354 613 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 EGFP01133 1207 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 HMGN2P05204 90 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 CLUP10909 449 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 FOSL2P15408 326 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 PSMB1P20618 241 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 ATP5A1P25705 553 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 PSMB5P28074 263 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 NTSP30990 170 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 SOX2P48431 317 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 PRMT2P55345 433 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 CDK5Q00535 292 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 MC2RQ01718 297 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 TGM3Q08188 693 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 PRAMEF14Q5SWL7 426 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 PRAMEF13Q5VWM6 474 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 ZDHHC20Q5W0Z9 365 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 NXPE4Q6UWF7 544 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 TMED4Q7Z7H5 227 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 C17orf64Q86WR6 236 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 C17orf47Q8NEP4 570 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 RNASE11Q8TAA1 199 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 TMEM255BQ8WV15 326 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 CNOT9Q92600 299 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 OSTF1Q92882 214 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 DERL3Q96Q80 235 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 CMSS1Q9BQ75 279 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 GPN1Q9HCN4 374 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 KCNMB2Q9Y691 235 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 C7orf66A4D0T2 115 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 EFCAB7A8K855 629 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 DISC1C4P0D8 188 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 SLC16A5O15375 505 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 RPP14O95059 124 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 ACAA1P09110 424 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 MTNR1BP49286 362 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 ZP1P60852 638 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 ST3GAL3Q11203 375 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 ZNF155Q12901 538 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 KRT33BQ14525 404 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 HEPHL1Q6MZM0 1159 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 C3orf33Q6P1S2 294 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 HAGHLQ6PII5 290 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 RBMS3Q6XE24 437 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 OR52I2Q8NH67 350 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 THAP4Q8WY91 577 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 CXorf40BQ96DE9 158 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 TSNAXQ99598 290 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 RSPO3Q9BXY4 272 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 SYNPO2LQ9H987 977 aa10.89□□□□□ -0.67
SMPD4-209ENST00000439886 CDV3Q9UKY7 258 aaKnown RBP10.89□□□□□ -0.67
SMPD4-209ENST00000439886 NEDD8-MDP1E9PL57 170 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 SDC3O75056 442 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 SOCS5O75159 536 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 CSN2P05814 226 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 ELFN1P0C7U0 828 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 SULT1A3P0DMM9 295 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 SULT1A4P0DMN0 295 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 ZNF35P13682 527 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 ANXA11P50995 505 aaKnown RBP10.88□□□□□ -0.67
SMPD4-209ENST00000439886 POLR2LP62875 67 aaKnown RBP10.88□□□□□ -0.67
SMPD4-209ENST00000439886 CAMK1Q14012 370 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 MRPL58Q14197 206 aaKnown RBP10.88□□□□□ -0.67
SMPD4-209ENST00000439886 SLC22A10Q63ZE4 541 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 CARFQ8N187 725 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 CBARPQ8N350 705 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-209ENST00000439886 ARL14Q8N4G2 192 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 C2orf69Q8N8R5 385 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 WDSUB1Q8N9V3 476 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 OR5T2Q8NGG2 359 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 RELTQ969Z4 430 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 NEURL3Q96EH8 262 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 LRIG1Q96JA1 1093 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 OR1F2PQ96R84 312 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 CCDC86Q9H6F5 360 aaKnown RBP10.88□□□□□ -0.67
SMPD4-209ENST00000439886 TMEM185BQ9H7F4 350 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 NTMQ9P121 344 aa10.88□□□□□ -0.67
SMPD4-209ENST00000439886 GPR55Q9Y2T6 319 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-209ENST00000439886 KCNE3Q9Y6H6 103 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms