RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 FAM76AQ8TAV0 307 aa13□□□□□ -0.33
HDAC8-213ENST00000436675 PPCDCQ96CD2 204 aa13□□□□□ -0.33
HDAC8-213ENST00000436675 MRGPRX4Q96LA9 322 aa13□□□□□ -0.33
HDAC8-213ENST00000436675 TSSK3Q96PN8 268 aa13□□□□□ -0.33
HDAC8-213ENST00000436675 SORCS2Q96PQ0 1159 aa13□□□□□ -0.33
HDAC8-213ENST00000436675 SOX7Q9BT81 388 aa13□□□□□ -0.33
HDAC8-213ENST00000436675 TRMOQ9BU70 441 aa13□□□□□ -0.33
HDAC8-213ENST00000436675 WBP11Q9Y2W2 641 aaKnown RBP13□□□□□ -0.33
HDAC8-213ENST00000436675 PTGDR2Q9Y5Y4 395 aa13□□□□□ -0.33
HDAC8-213ENST00000436675 H3BNH8 94 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 CYP7B1O75881 506 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 RSL1D1O76021 490 aaKnown RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 SNRPAP09012 282 aaKnown RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 CFPP27918 469 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 SRP14P37108 136 aaKnown RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 MLC1Q15049 377 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 LSRQ86X29 649 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 SLC22A9Q8IVM8 553 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 ANKS4BQ8N8V4 417 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 APH1AQ96BI3 265 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 L3HYPDHQ96EM0 354 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 VRK1Q99986 396 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 FUT8Q9BYC5 575 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 IQCGQ9H095 443 aaKnown RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 REEP4Q9H6H4 257 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 TNFRSF12AQ9NP84 129 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 RRAGDQ9NQL2 400 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 ZCCHC3Q9NUD5 404 aaKnown RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 BAIAP2L1Q9UHR4 511 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 NOSIPQ9Y314 301 aaKnown RBP12.99□□□□□ -0.33
HDAC8-213ENST00000436675 ACTL7BQ9Y614 415 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 FKBP7Q9Y680 259 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 KCNE3Q9Y6H6 103 aa12.99□□□□□ -0.33
HDAC8-213ENST00000436675 LRP5LA4QPB2 252 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 ATP6V1G2-DDX39BF2Z307 99 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 SULT2B1O00204 365 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 HMGN2P05204 90 aaKnown RBP12.98□□□□□ -0.33
HDAC8-213ENST00000436675 GSTA1P08263 222 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 APOBEC3AP31941 199 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-213ENST00000436675 DIO1P49895 249 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 SUMO3P55854 103 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-213ENST00000436675 GABRA6Q16445 453 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 TIGD2Q4W5G0 525 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 TRIM46Q7Z4K8 759 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 RFLNBQ8N5W9 214 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 ZNF527Q8NB42 609 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 OR52E4Q8NGH9 312 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 OR5W2Q8NH69 310 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 FAM120BQ96EK7 910 aaKnown RBP12.98□□□□□ -0.33
HDAC8-213ENST00000436675 FKRPQ9H9S5 495 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 ASB6Q9NWX5 421 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 EMC3Q9P0I2 261 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 ZNF180Q9UJW8 692 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 PYCARDQ9ULZ3 195 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 TGP01266 2768 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 PKD1L1Q8TDX9 2849 aa12.98□□□□□ -0.33
HDAC8-213ENST00000436675 HSPA4LO95757 839 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 TFPIP10646 304 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 NTF4P34130 210 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 PHC1P78364 1004 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 SLC25A3Q00325 362 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 KIAA0040Q15053 153 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 MST1LQ2TV78 715 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 SLC25A53Q5H9E4 307 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 EXOSC6Q5RKV6 272 aaKnown RBP12.97□□□□□ -0.33
HDAC8-213ENST00000436675 DCST2Q5T1A1 773 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 C3orf33Q6P1S2 294 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 ZCCHC12Q6PEW1 402 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 MEX3DQ86XN8 651 aaKnown RBP12.97□□□□□ -0.33
HDAC8-213ENST00000436675 WDR31Q8NA23 367 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 TOR1AIP2Q8NFQ8 470 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 ARL8AQ96BM9 186 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 THUMPD3Q9BV44 507 aaKnown RBP12.97□□□□□ -0.33
HDAC8-213ENST00000436675 HOXD1Q9GZZ0 328 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 ADAM19Q9H013 955 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 PIGUQ9H490 435 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 SIRT3Q9NTG7 399 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-213ENST00000436675 TAS2R16Q9NYV7 291 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 MOKQ9UQ07 419 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 CCL27Q9Y4X3 112 aa12.97□□□□□ -0.33
HDAC8-213ENST00000436675 NDUFS8O00217 210 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 ZNF264O43296 627 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 KCNAB3O43448 404 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 ITGA5P08648 1049 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 UBL4AP11441 157 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 ZNF23P17027 643 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 SDC1P18827 310 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 FRKP42685 505 aaPredicted RBP12.96□□□□□ -0.33
HDAC8-213ENST00000436675 ATP12AP54707 1039 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 MERTKQ12866 999 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 TP53BP2Q13625 1128 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 CBFBQ13951 182 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 SWI5Q1ZZU3 235 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 CLEC6AQ6EIG7 209 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 ABLIM2Q6H8Q1 611 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 C8orf74Q6P047 294 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 TMPPEQ6ZT21 453 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 CCDC103Q8IW40 242 aa12.96□□□□□ -0.33
HDAC8-213ENST00000436675 ADAMTS15Q8TE58 950 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms