RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 AKAP8O43823 692 aaKnown RBP9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 ADAM11O75078 769 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 LYPD3O95274 346 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 MRPL3P09001 348 aaKnown RBP9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 CT62P0C5K7 136 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 IL9P15248 144 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 UGT2B7P16662 529 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 EN2P19622 333 aaPredicted RBP9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 RFX3P48380 749 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 BMFQ96LC9 184 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 PPA2Q9H2U2 334 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 MCUBQ9NWR8 336 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 B3GNT2Q9NY97 397 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 GMEB2Q9UKD1 530 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 SPATA2Q9UM82 520 aa9.65□□□□□ -0.87
CLSTN1-203ENST00000435891 BHLHE40O14503 412 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 SLC22A5O76082 557 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 SLC2A2P11168 524 aaPredicted RBP9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 DUSP8Q13202 625 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 IL18Q14116 193 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 OR1Q1Q15612 314 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 FHL5Q5TD97 284 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 NIPAL3Q6P499 406 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 OR13C2Q8NGS9 318 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 PTP4A1Q93096 173 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 KISS1RQ969F8 398 aaPredicted RBP9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 TOE1Q96GM8 510 aaKnown RBP9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 C1QTNF6Q9BXI9 259 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 PBX4Q9BYU1 374 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 ZNF350Q9GZX5 532 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 STARD5Q9NSY2 213 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 NLGN3Q9NZ94 848 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 CYB5R1Q9UHQ9 305 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 BAIAP2Q9UQB8 552 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 SLC22A7Q9Y694 548 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 TRAV27A0A087WT01 109 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 GXYLT2A0PJZ3 443 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 RASGRP1O95267 797 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 HLA-DPB1P04440 258 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 CTSBP07858 339 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 ACSL1P33121 698 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 EVX1P49640 407 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 PPP1CAP62136 330 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 TATDN3Q17R31 274 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 DCST2Q5T1A1 773 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 SHEQ5VZ18 495 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 DGAT2L6Q6ZPD8 337 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 CYB561A3Q8NBI2 242 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 FANK1Q8TC84 345 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 NT5CQ8TCD5 201 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 ZNF431Q8TF32 576 aaPredicted RBP9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 AP3S1Q92572 193 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 FAM131CQ96AQ9 280 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 RNF121Q9H920 327 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 MEPEQ9NQ76 525 aaPredicted RBP9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 CLDND1Q9NY35 253 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 H2AFY2Q9P0M6 372 aaPredicted RBP9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 FANCMQ8IYD8 2048 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 OR6C74A6NCV1 312 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 GTPBP1O00178 669 aaKnown RBP9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 NTSR1P30989 418 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 MAB21L1Q13394 359 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 GPR18Q14330 331 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 TRIQKQ629K1 86 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 ANKRD54Q6NXT1 300 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 TMEM65Q6PI78 240 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 RPTNQ6XPR3 784 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 USP53Q70EK8 1073 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 CREB3L2Q70SY1 520 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 OR52N1Q8NH53 320 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 ST8SIA4Q92187 359 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 FAM3CQ92520 227 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 NR4A3Q92570 626 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 RNF170Q96K19 258 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 ALG8Q9BVK2 526 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 TTTY10Q9BZA0 68 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 LIN7BQ9HAP6 207 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 NLKQ9UBE8 527 aa9.64□□□□□ -0.87
CLSTN1-203ENST00000435891 UNC119BA6NIH7 251 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 TEX46H3BTG2 121 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 GYPBP06028 91 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 PPP3R1P63098 170 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 E2F1Q01094 437 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 FIGLAQ6QHK4 219 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 ZNF761Q86XN6 746 aaPredicted RBP9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 OR4M1Q8NGD0 313 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 OR51A7Q8NH64 312 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 TMEM239Q8WW34 195 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 GIMAP1Q8WWP7 306 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 SERINC2Q96SA4 455 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 GDF15Q99988 308 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 SEC22CQ9BRL7 303 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 TMEM106CQ9BVX2 250 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 OR51V1Q9H2C8 321 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 PIGUQ9H490 435 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 IFT46Q9NQC8 304 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 MED17Q9NVC6 651 aa9.63□□□□□ -0.87
CLSTN1-203ENST00000435891 USP36Q9P275 1121 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms