RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CXCL13O43927 109 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 HNRNPCL1O60812 293 aaKnown RBP14.59□□□□□ -0.07
SMPD4-207ENST00000435455 TNFSF13O75888 250 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 HNRNPCL4P0DMR1 293 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 BMP2P12643 396 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 IL11P20809 199 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 CARD18P57730 90 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 SESN3P58005 492 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 MAPK11Q15759 364 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 ZSWIM7Q19AV6 140 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 PRAMEF8Q5VWM4 474 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 PRAMEF7Q5VXH5 474 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 PPP4R4Q6NUP7 873 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 C3orf33Q6P1S2 294 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 HMGN2P46Q86SG4 172 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 ZNF440Q8IYI8 595 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 CNEP1R1Q8N9A8 125 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 SLC38A5Q8WUX1 472 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 CNOT9Q92600 299 aaKnown RBP14.59□□□□□ -0.07
SMPD4-207ENST00000435455 OSTF1Q92882 214 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 A4GALTQ9NPC4 353 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 SERINC1Q9NRX5 453 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 SLC25A37Q9NYZ2 338 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 PRDM4Q9UKN5 801 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 CORO2BQ9UQ03 480 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 GMEB1Q9Y692 573 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 DSPPQ9NZW4 1301 aa14.59□□□□□ -0.07
SMPD4-207ENST00000435455 TRBV5-3A0A0A0MS03 114 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 CLDN24A6NM45 220 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 MSTNO14793 375 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 AQP8O94778 261 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 PABPC4LP0CB38 370 aaKnown RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 SLC7A1P30825 629 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 RYKP34925 604 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 CPA2P48052 419 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 GUCY1A3Q02108 690 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 MERTKQ12866 999 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 LARS2Q15031 903 aaKnown RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 TMEM176BQ3YBM2 270 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 LIN52Q52LA3 116 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 MRPL2Q5T653 305 aaKnown RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 MSRB3Q8IXL7 192 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 OR52P1PQ8NH57 321 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF563Q8TA94 476 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 CPNE4Q96A23 557 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF524Q96C55 264 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 TMEM19Q96HH6 336 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 REXO5Q96IC2 774 aaKnown RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 RBM24Q9BX46 236 aaKnown RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 DNAJB12Q9NXW2 375 aaKnown RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 VAPAQ9P0L0 249 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 SLAMF8Q9P0V8 285 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF232Q9UNY5 417 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 SPIN1Q9Y657 262 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-207ENST00000435455 CREBBPQ92793 2442 aa14.58□□□□□ -0.08
SMPD4-207ENST00000435455 EVPLLA8MZ36 301 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 C5orf58C9J3I9 102 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 FAAHO00519 579 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 ANGPT2O15123 496 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 BCAS1O75363 584 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-207ENST00000435455 THBS1P07996 1170 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 UQCRBP14927 111 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 SHC1P29353 583 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 APOBEC1P41238 236 aaKnown RBP14.57□□□□□ -0.08
SMPD4-207ENST00000435455 KIR2DL2P43627 348 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-207ENST00000435455 KIR2DL3P43628 341 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 ARFIP2P53365 341 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 SORDQ00796 357 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 TLE4Q04727 773 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 MYBPHQ13203 477 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 GUSBP1Q15486 140 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 GTF2IRD2BQ6EKJ0 949 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 PLEKHM3Q6ZWE6 761 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 LUZP2Q86TE4 346 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 GTF2IRD2Q86UP8 949 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 DPP10Q8N608 796 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 ATP6V1C2Q8NEY4 427 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 BBS10Q8TAM1 723 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 SLC25A43Q8WUT9 341 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-207ENST00000435455 STARD4Q96DR4 205 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF559Q9BR84 538 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 ARMC7Q9H6L4 198 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 BCL2L10Q9HD36 194 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 GLRX2Q9NS18 164 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-207ENST00000435455 IFT52Q9Y366 437 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 NDUFAF1Q9Y375 327 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 EMC9Q9Y3B6 208 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 MPDZO75970 2070 aa14.57□□□□□ -0.08
SMPD4-207ENST00000435455 A8MXE2 369 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 SMNDC1O75940 238 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMPD4-207ENST00000435455 PLGP00747 810 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-207ENST00000435455 ARAFP10398 606 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 FKBP2P26885 142 aaKnown RBP14.56□□□□□ -0.08
SMPD4-207ENST00000435455 MDH1P40925 334 aaKnown RBP14.56□□□□□ -0.08
SMPD4-207ENST00000435455 HTR3AP46098 478 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 CTBP2P56545 445 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 SIRPAP78324 504 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 PLAURQ03405 335 aa14.56□□□□□ -0.08
SMPD4-207ENST00000435455 ZNF239Q16600 458 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms