RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 PCDHGB6Q9Y5F9 930 aa13.76□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF891A8MT65 544 aaPredicted RBP13.75□□□□□ -0.21
TMEM40-204ENST00000435218 ETV2O00321 342 aaPredicted RBP13.75□□□□□ -0.21
TMEM40-204ENST00000435218 KLF4O43474 513 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 MITFO75030 526 aaPredicted RBP13.75□□□□□ -0.21
TMEM40-204ENST00000435218 PNMTP11086 282 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 MYF6P23409 242 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 GSSP48637 474 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 HLCSP50747 726 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 CTBP2P56545 445 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 ESRRGP62508 458 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 PRKCDQ05655 676 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 TSPAN31Q12999 210 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 KEAP1Q14145 624 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 COL28A1Q2UY09 1125 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 ZIK1Q3SY52 487 aaPredicted RBP13.75□□□□□ -0.21
TMEM40-204ENST00000435218 SLC22A10Q63ZE4 541 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 B3GNTL1Q67FW5 361 aaPredicted RBP13.75□□□□□ -0.21
TMEM40-204ENST00000435218 KLHL17Q6TDP4 642 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 ATG4DQ86TL0 474 aaPredicted RBP13.75□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF555Q8NEP9 628 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 PIGXQ8TBF5 258 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 GNPDA2Q8TDQ7 276 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF570Q96NI8 536 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 PITX2Q99697 317 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 UCK2Q9BZX2 261 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 GALNT9Q9HCQ5 603 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 PPP4R1LQ9P1A2 415 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 REV1Q9UBZ9 1251 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 TMEM5Q9Y2B1 443 aa13.75□□□□□ -0.21
TMEM40-204ENST00000435218 FPR3P25089 353 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ITGA3P26006 1051 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ALDH6A1Q02252 535 aaKnown RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 SRSF6Q13247 344 aaKnown RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF468Q5VIY5 522 aaPredicted RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 BICRALQ6AI39 1079 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 GALNT5Q7Z7M9 940 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 NRMQ8IXM6 262 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 CYP4Z2PQ8N1L4 340 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 BEST3Q8N1M1 668 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 GALNT16Q8N428 558 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF248Q8NDW4 579 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF563Q8TA94 476 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 SNIP1Q8TAD8 396 aaKnown RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 CYGBQ8WWM9 190 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ST8SIA1Q92185 356 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 FAM122AQ96E09 287 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 TMEM43Q9BTV4 400 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 DPH1Q9BZG8 443 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 STMN3Q9NZ72 180 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ABI3Q9P2A4 366 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 POLHQ9Y253 713 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 MED31Q9Y3C7 131 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 LOC100130705A0A1B0GUX0 176 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 B4DXG7 233 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 SNX4O95219 450 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 CCL3P10147 92 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 OSMP13725 252 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 POU2F1P14859 743 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 WT1P19544 449 aaPredicted RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ITPKBP27987 946 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 HTR3AP46098 478 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 CYB561P49447 251 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 LSM11P83369 360 aaKnown RBP eCLIP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 CDC20Q12834 499 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 QPRTQ15274 297 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ATP1A1-AS1Q5TC04 95 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ABHD17BQ5VST6 288 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 TTC33Q6PID6 262 aaPredicted RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 TMPRSS11FQ6ZWK6 438 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 PRICKLE2Q7Z3G6 844 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 FADS6Q8N9I5 356 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 TMEM234Q8WY98 164 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 GTPBP3Q969Y2 492 aaKnown RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF524Q96C55 264 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 HRASLS5Q96KN8 279 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 KLHDC3Q9BQ90 382 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 PROK2Q9HC23 129 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 MEPEQ9NQ76 525 aaPredicted RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 TAS2R10Q9NYW0 307 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 DKK4Q9UBT3 224 aa13.74□□□□□ -0.21
TMEM40-204ENST00000435218 NDRG4Q9ULP0 352 aaKnown RBP13.74□□□□□ -0.21
TMEM40-204ENST00000435218 FREM3P0C091 2139 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 NCKAP5O14513 1909 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 C17orf51A8MQB3 221 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 NKX2-8O15522 239 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 NTN1O95631 604 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 NUDT14O95848 222 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 TP53P04637 393 aaPredicted RBP13.73□□□□□ -0.21
TMEM40-204ENST00000435218 GNAO1P09471 354 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 GP1BBP13224 206 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 POLR2IP36954 125 aaKnown RBP13.73□□□□□ -0.21
TMEM40-204ENST00000435218 IL1RL1Q01638 556 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 FOXD4Q12950 439 aaPredicted RBP13.73□□□□□ -0.21
TMEM40-204ENST00000435218 SLC25A53Q5H9E4 307 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 GRINAQ7Z429 371 aa13.73□□□□□ -0.21
TMEM40-204ENST00000435218 ZNF227Q86WZ6 799 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms