RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 ARL8AQ96BM9 186 aa10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 ZNF524Q96C55 264 aa10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 STACQ99469 402 aa10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 C1QTNF6Q9BXI9 259 aa10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 QRSL1Q9H0R6 528 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 DCDC2Q9UHG0 476 aa10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 KCNS2Q9ULS6 477 aa10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 FIS1Q9Y3D6 152 aa10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 ATP23Q9Y6H3 246 aa10.22□□□□□ -0.77
CHRNA1-207ENST00000435083 NPIPB8E9PQR5 432 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 G3V2L1 256 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 H7C417 338 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 LY6HO94772 140 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 H6PDO95479 791 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 CSF3P09919 207 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 PRPH2P23942 346 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 IGFBP5P24593 272 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 THBS2P35442 1172 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 GZMKP49863 264 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 EFNA4P52798 201 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 ATP12AP54707 1039 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 NAA20P61599 178 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 RPL38P63173 70 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 CHRNB3Q05901 458 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 PDE7AQ13946 482 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 SLC25A53Q5H9E4 307 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 DCST2Q5T1A1 773 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 FBXW9Q5XUX1 488 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 FAM166AQ6J272 317 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 C3orf33Q6P1S2 294 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 OR5W2Q8NH69 310 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 ACMSDQ8TDX5 336 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 SIRT3Q9NTG7 399 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 EMCNQ9ULC0 261 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 NOSIPQ9Y314 301 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 SLC25A15Q9Y619 301 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 KCNE3Q9Y6H6 103 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 PMF1-BGLAPU3KQ54 211 aa10.21□□□□□ -0.78
CHRNA1-207ENST00000435083 LOC100289279A0A1B0GTE1 492 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 SLC35F4A4IF30 521 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 SULT2B1O00204 365 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 ZNF264O43296 627 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 CYP7B1O75881 506 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 BMP4P12644 408 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 DIO1P49895 249 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 TP53BP2Q13625 1128 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 CBFBQ13951 182 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 GGTLC2Q14390 218 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 TIGD2Q4W5G0 525 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 RFTN2Q52LD8 501 aaPredicted RBP10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 ZNF544Q6NX49 715 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 OR2T11Q8NH01 316 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 APH1AQ96BI3 265 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 MTERF3Q96E29 417 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 FCRL1Q96LA6 429 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 INPP5KQ9BT40 448 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 ACTRT3Q9BYD9 372 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 SERINC1Q9NRX5 453 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 EMC3Q9P0I2 261 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 TBK1Q9UHD2 729 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 FAF1Q9UNN5 650 aaPredicted RBP10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 DTNAQ9Y4J8 743 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 NBEAL1Q6ZS30 2694 aa10.2□□□□□ -0.78
CHRNA1-207ENST00000435083 ESPNB1AK53 854 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 EIF4E2O60573 245 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 LINC00032P0C843 101 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 TFPIP10646 304 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 UBL4AP11441 157 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 ECHS1P30084 290 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 ASMTP46597 345 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 CCT3P49368 545 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 CSNK2A1P68400 391 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 MLC1Q15049 377 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 SPDYE7PQ495Y7 208 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 GALNTL6Q49A17 601 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 FAM120AOSQ5T036 256 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 TMPPEQ6ZT21 453 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 R3HCC1LQ7Z5L2 792 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 C3orf49Q96BT1 292 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 THUMPD3Q9BV44 507 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 ASB6Q9NWX5 421 aa10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.19□□□□□ -0.78
CHRNA1-207ENST00000435083 A0A1W2PPM1 405 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 NPIPB9F8W1W9 429 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 AZIN1O14977 448 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 GLRA3O75311 464 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 URI1O94763 535 aaPredicted RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PROCP04070 461 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 KRT16P08779 473 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 ABHD2P08910 425 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 NEFHP12036 1026 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 DDX5P17844 614 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 HNF1AP20823 631 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 HPCAL1P37235 193 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 PDLIM4P50479 330 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 FOXG1P55316 489 aaPredicted RBP10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 SESN3P58005 492 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 DNAJB13P59910 316 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 MERTKQ12866 999 aa10.18□□□□□ -0.78
CHRNA1-207ENST00000435083 GABRA6Q16445 453 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms