RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 AKAP8O43823 692 aaKnown RBP11□□□□□ -0.65
CTCFL-209ENST00000433949 CDC123O75794 336 aaPredicted RBP11□□□□□ -0.65
CTCFL-209ENST00000433949 UPK1BO75841 260 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 NTN1O95631 604 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 IL1AP01583 271 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 IGHA1P01876 353 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CSF2RBP32927 897 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 SLC1A3P43003 542 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 RFX3P48380 749 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CCL7P80098 99 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 KCNAB1Q14722 419 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 ULK3Q6PHR2 472 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 SMARCD3Q6STE5 483 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 HSDL2Q6YN16 418 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 TMPRSS9Q7Z410 1059 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 ZNF554Q86TJ5 538 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 OR7G1Q8NGA0 311 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CNOT9Q92600 299 aaKnown RBP11□□□□□ -0.65
CTCFL-209ENST00000433949 CNPPD1Q9BV87 410 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 OR10A5Q9H207 317 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CBLCQ9ULV8 474 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 SIGLEC7Q9Y286 467 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 MMACHCQ9Y4U1 282 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CLDN16Q9Y5I7 305 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 COL5A1P20908 1838 aaPredicted RBP11□□□□□ -0.65
CTCFL-209ENST00000433949 EFCAB7A8K855 629 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 NPIPB9F8W1W9 429 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 DYRK3O43781 588 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 DUX1O43812 170 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 SNX4O95219 450 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 ZGLP1P0C6A0 271 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 LIMS3P0CW19 117 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 LIMS4P0CW20 117 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 SAGP10523 405 aaPredicted RBP11□□□□□ -0.65
CTCFL-209ENST00000433949 MAKP20794 623 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 TBXA2RP21731 343 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 GABRA5P31644 462 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 ATP6V1E1P36543 226 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 GRK6P43250 576 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 MAT1AQ00266 395 aaKnown RBP11□□□□□ -0.65
CTCFL-209ENST00000433949 DOC2BQ14184 412 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CPEB4Q17RY0 729 aaKnown RBP eCLIP11□□□□□ -0.65
CTCFL-209ENST00000433949 ALG10BQ5I7T1 473 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 PLEKHG7Q6ZR37 379 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 ZAR1Q86SH2 424 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 ZNF440Q8IYI8 595 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CACTIN-AS1Q8N1I8 211 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 KLHL36Q8N4N3 616 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 RCBTB1Q8NDN9 531 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 OR52N1Q8NH53 320 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 PFN4Q8NHR9 129 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 C16orf52Q8NHV5 167 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 OR1F2PQ96R84 312 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 PRRX2Q99811 253 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CMC2Q9NRP2 79 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 C20orf141Q9NUB4 165 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 TNFRSF10DQ9UBN6 386 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 ERVK-19Q9WJR5 959 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 CARD8Q9Y2G2 431 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 GSTK1Q9Y2Q3 226 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 OR10H1Q9Y4A9 318 aa11□□□□□ -0.65
CTCFL-209ENST00000433949 PTPRZ1P23471 2315 aaPredicted RBP10.99□□□□□ -0.65
CTCFL-209ENST00000433949 A0A1B0GWA3 101 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 A0A1W2PQM1 296 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 HTR3EA5X5Y0 456 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 LOC110117498-PIK3R3F6TDL0 507 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 IFNA16P05015 189 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 CT45A8P0DMV1 189 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 CT45A9P0DMV2 189 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 ACAA2P42765 397 aaKnown RBP10.99□□□□□ -0.65
CTCFL-209ENST00000433949 GPR143P51810 404 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 BTG2P78543 158 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 PLAURQ03405 335 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 KRR1Q13601 381 aaKnown RBP10.99□□□□□ -0.65
CTCFL-209ENST00000433949 CT45A2Q5DJT8 189 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 RTL4Q6ZR62 310 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 PLXDC1Q8IUK5 500 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 CPOQ8IVL8 374 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 FAM181AQ8N9Y4 354 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 CEP19Q96LK0 163 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 KCTD7Q96MP8 289 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 LRFN5Q96NI6 719 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 CCNL2Q96S94 520 aaPredicted RBP10.99□□□□□ -0.65
CTCFL-209ENST00000433949 HOXD1Q9GZZ0 328 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 TMEM9BQ9NQ34 198 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 HINT3Q9NQE9 182 aaKnown RBP10.99□□□□□ -0.65
CTCFL-209ENST00000433949 TXNL4BQ9NX01 149 aaKnown RBP10.99□□□□□ -0.65
CTCFL-209ENST00000433949 RHBDL2Q9NX52 303 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 RPS6KB2Q9UBS0 482 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 SLC35A3Q9Y2D2 325 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 ZNF292O60281 2723 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 IQCMA0A1B0GVH7 501 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 FUOMA2VDF0 154 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 SLC22A31A6NKX4 558 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 POLR1CO15160 346 aaPredicted RBP10.99□□□□□ -0.65
CTCFL-209ENST00000433949 LDOC1O95751 146 aaPredicted RBP10.99□□□□□ -0.65
CTCFL-209ENST00000433949 IGKV1D-16P01601 117 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 GAAP10253 952 aa10.99□□□□□ -0.65
CTCFL-209ENST00000433949 CD59P13987 128 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms