RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 T-ENOLP0DO92 83 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 GCKP35557 465 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 HPCAP84074 193 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 SF3B4Q15427 424 aaKnown RBP eCLIP15.24■□□□□ 0.03
UBE3D-204ENST00000430071 CD226Q15762 336 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 CYP51A1Q16850 503 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 PDZK1Q5T2W1 519 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 AAGABQ6PD74 315 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 TRPM8Q7Z2W7 1104 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 CALHM3Q86XJ0 350 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 GRAMD2AQ8IUY3 354 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 NFKBIDQ8NI38 313 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 ZNF845Q96IR2 970 aaPredicted RBP15.24■□□□□ 0.03
UBE3D-204ENST00000430071 SH3GL1Q99961 368 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 HOXD1Q9GZZ0 328 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 PIF1Q9H611 641 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 DNAJB12Q9NXW2 375 aaKnown RBP15.24■□□□□ 0.03
UBE3D-204ENST00000430071 USP22Q9UPT9 525 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 DSPPQ9NZW4 1301 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 IGLV3-32A0A0A0MS00 114 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 A0A1W2PQD3 144 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 FAM221AA4D161 298 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 H3BML4 177 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 OIP5O43482 229 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 TNFSF13O75888 250 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 IL18BPO95998 194 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 OPN1LWP04000 364 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 HPGDP15428 266 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 OPRM1P35372 400 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 CLK3P49761 638 aaKnown RBP15.24■□□□□ 0.03
UBE3D-204ENST00000430071 CRISP3P54108 245 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 CBX1P83916 185 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 CDK6Q00534 326 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 TMEM44Q2T9K0 475 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 SERPINA11Q86U17 422 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 SLC15A3Q8IY34 581 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 ZNF614Q8N883 585 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 ZNF527Q8NB42 609 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 SMPDL3BQ92485 455 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 NSL1Q96IY1 281 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 HOPXQ9BPY8 73 aaPredicted RBP15.24■□□□□ 0.03
UBE3D-204ENST00000430071 MTHFD2LQ9H903 347 aaPredicted RBP15.24■□□□□ 0.03
UBE3D-204ENST00000430071 SDHAF3Q9NRP4 125 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 CALML5Q9NZT1 146 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 GMPR2Q9P2T1 348 aaKnown RBP15.24■□□□□ 0.03
UBE3D-204ENST00000430071 VDAC3Q9Y277 283 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 DTNAQ9Y4J8 743 aa15.24■□□□□ 0.03
UBE3D-204ENST00000430071 ARID1AO14497 2285 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 SETD2Q9BYW2 2564 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-204ENST00000430071 ZNF469Q96JG9 3925 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-204ENST00000430071 TMEM247A6NEH6 219 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 AGAP5A6NIR3 686 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 CCT8L1PA6NM43 557 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 NME4O00746 187 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 NDUFB5O43674 189 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 PGM3O95394 542 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 PEPDP12955 493 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 RPS4Y1P22090 263 aaKnown RBP15.23■□□□□ 0.03
UBE3D-204ENST00000430071 DNAJA1P31689 397 aaKnown RBP15.23■□□□□ 0.03
UBE3D-204ENST00000430071 SLC7A2P52569 658 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 PSME3P61289 254 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 PLAURQ03405 335 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 C17orf67Q0P5P2 114 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 SCARB2Q14108 478 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 BCL2A1Q16548 175 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 VWA1Q6PCB0 445 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 ZNF524Q96C55 264 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 SH3YL1Q96HL8 342 aaPredicted RBP15.23■□□□□ 0.03
UBE3D-204ENST00000430071 ZNF583Q96ND8 569 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 TM9SF2Q99805 663 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 ECSITQ9BQ95 431 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 PINK1Q9BXM7 581 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 BCL2L10Q9HD36 194 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 GALNT8Q9NY28 637 aa15.23■□□□□ 0.03
UBE3D-204ENST00000430071 DSCAMO60469 2012 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 A0A0G2JPF8 293 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 A0A1W2PNV4 684 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 SERINC4A6NH21 518 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 CLDN24A6NM45 220 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 HNRNPCL2B2RXH8 293 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 HNRNPCL3B7ZW38 293 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 C5orf58C9J3I9 102 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 HNRNPCL1O60812 293 aaKnown RBP15.22■□□□□ 0.03
UBE3D-204ENST00000430071 BCAS1O75363 584 aaPredicted RBP15.22■□□□□ 0.03
UBE3D-204ENST00000430071 HNRNPCL4P0DMR1 293 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 SLC25A3Q00325 362 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 RBBP4Q09028 425 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 GNA13Q14344 377 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 NDUFAF6Q330K2 333 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 PRAMEF8Q5VWM4 474 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 PRAMEF7Q5VXH5 474 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 REEP3Q6NUK4 255 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 ARPINQ7Z6K5 226 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 METTL25Q8N6Q8 603 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 C11orf65Q8NCR3 313 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 BBS10Q8TAM1 723 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 PHOSPHO1Q8TCT1 267 aa15.22■□□□□ 0.03
UBE3D-204ENST00000430071 RBM24Q9BX46 236 aaKnown RBP15.22■□□□□ 0.03
UBE3D-204ENST00000430071 RSPO3Q9BXY4 272 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms