RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 SLC16A14Q7RTX9 510 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 OR1J4Q8NGS1 313 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CNTNAP3BQ96NU0 1288 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 HIPK2Q9H2X6 1198 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CACNG2Q9Y698 323 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 D6RAR5 112 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 C1orf105O95561 183 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 ALDOBP05062 364 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 HOXA9P31269 272 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CLDN17P56750 224 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 RAB41Q5JT25 222 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 TLDC1Q6P9B6 456 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 HTR3DQ70Z44 454 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 ESX1Q8N693 406 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CTRCQ99895 268 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 TMEM269A0A1B0GVZ9 245 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CLN5O75503 358 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CCL11P51671 97 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 WBP2NLQ6ICG8 309 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 OR7E24Q6IFN5 339 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 COX15Q7KZN9 410 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CBARPQ8N350 705 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 OR13J1Q8NGT2 312 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 BTBD2Q9BX70 525 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 OR2B2Q9GZK3 357 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CALHM2Q9HA72 323 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 SIT1Q9Y3P8 196 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF705FA8MVS1 300 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF705DP0CH99 300 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF705BP0CI00 300 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 MAOAP21397 527 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 ATP1B3P54709 279 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 FAM78AQ5JUQ0 283 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 MRPL43Q8N983 215 aaKnown RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 OR7G2Q8NG99 324 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 BOLA2-SMG1P6H3BVE0 249 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 PAN3Q58A45 887 aaKnown RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 NIPAL3Q6P499 406 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 SBSNQ6UWP8 590 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 PSMF1Q92530 271 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 COQ3Q9NZJ6 369 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 NUMBLQ9Y6R0 609 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 SLC43A1O75387 559 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 CSF1P09603 554 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 CPMP14384 443 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 RPS2P15880 293 aaKnown RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 TAS2R31P59538 309 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 RUNX2Q13950 521 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 SULF2Q8IWU5 870 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 PAPD5Q8NDF8 572 aaKnown RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 B3GNT7Q8NFL0 401 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 PRRC1Q96M27 445 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF300Q96RE9 604 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 CLSTN3Q9BQT9 956 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 ZFP57Q9NU63 452 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 RFXAPO00287 272 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 CYB5BO43169 146 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 AQP9O43315 295 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 SNNO75324 88 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 MT-ND4P03905 459 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 ARAFP10398 606 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 PTGER4P35408 488 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 MAGEA6P43360 314 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 SLC14A1Q13336 389 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 RPE65Q16518 533 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 COQ5Q5HYK3 327 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 NAT6Q93015 286 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 MICU1Q9BPX6 476 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 LMF2Q9BU23 707 aaKnown RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 A0A1W2PPV4 95 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 J3KTA2 159 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 SOCS6O14544 535 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF322Q6U7Q0 402 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 C3orf58Q8NDZ4 430 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 DMBX1Q8NFW5 382 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 RNF128Q8TEB7 428 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 INSM2Q96T92 566 aaPredicted RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 UTP23Q9BRU9 249 aaKnown RBP14.41□□□□□ -0.1
PTPRF-206ENST00000429895 NICN1Q9BSH3 213 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 OR52D1Q9H346 318 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 SLC6A5Q9Y345 797 aa14.41□□□□□ -0.1
PTPRF-206ENST00000429895 SUSD5O60279 629 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 PAHP00439 452 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 OPN5Q6U736 354 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 SLC15A4Q8N697 577 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 OR2A12Q8NGT7 310 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 DEDD2Q8WXF8 326 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 RAB39BQ96DA2 213 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 EGLN3Q9H6Z9 239 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 UNKLQ9H9P5 680 aaKnown RBP14.4□□□□□ -0.1
PTPRF-206ENST00000429895 ELOVL3Q9HB03 270 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 RPS10P5Q9NQ39 176 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 H7C1C5 153 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 PCBD1P61457 104 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 LCN6P62502 163 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 CDK5R2Q13319 367 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 GPR18Q14330 331 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 LDLRAD1Q5T700 205 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 TMEM244Q5VVB8 128 aa14.4□□□□□ -0.1
PTPRF-206ENST00000429895 CPZQ66K79 652 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms