RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 PDE9AO76083 593 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 SOX14O95416 240 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 KLK2P20151 261 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 SSR4P51571 173 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 ESRRGP62508 458 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 TLE3Q04726 772 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 SKP2Q13309 424 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 FGFBP1Q14512 234 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 LARS2Q15031 903 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 EXT1Q16394 746 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 OR2T5Q6IEZ7 315 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 LRRC17Q8N6Y2 441 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 WDSUB1Q8N9V3 476 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 OR2T29Q8NH02 315 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 NUBPLQ8TB37 319 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 CYGBQ8WWM9 190 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 LZICQ8WZA0 190 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 G6PC3Q9BUM1 346 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 BDH2Q9BUT1 245 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 UGT2B28Q9BY64 529 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 OR11A1Q9GZK7 315 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 HPF1Q9NWY4 346 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 THUMPD1Q9NXG2 353 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 LRFN1Q9P244 771 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 PCDHGB3Q9Y5G1 929 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 LYVE1Q9Y5Y7 322 aa8.68□□□□□ -1.02
HMGCLL1-206ENST00000428842 TRIM64BA6NI03 449 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLITRK5O94991 958 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 SNAP29O95721 258 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 DBIP07108 87 aaKnown RBP8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 FAM87AP0C7U9 286 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 TTKP33981 857 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 MAGEA2P43356 314 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 ANXA11P50995 505 aaKnown RBP8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 NUP107P57740 925 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 TAS2R41P59536 307 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 OR1Q1Q15612 314 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 CCDC81Q6ZN84 652 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 CYP4Z1Q86W10 505 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 RAB43Q86YS6 212 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 CLVS1Q8IUQ0 354 aaPredicted RBP8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF248Q8NDW4 579 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF420Q8TAQ5 688 aaPredicted RBP8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 GEMIN6Q8WXD5 167 aaKnown RBP8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 UBE2FQ969M7 185 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 SPATA9Q9BWV2 254 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 DSN1Q9H410 356 aa8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 PDP1Q9P0J1 537 aaPredicted RBP8.67□□□□□ -1.02
HMGCLL1-206ENST00000428842 FAM166BA8MTA8 275 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 FBXO45P0C2W1 286 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 UBL4AP11441 157 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 DCKP27707 260 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GPR4P46093 362 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 TUBA3CQ13748 450 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF141Q15928 474 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 TMEM236Q5W0B7 351 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 TUBA3EQ6PEY2 450 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PODNL1Q6PEZ8 512 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PLEKHM3Q6ZWE6 761 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GDF7Q7Z4P5 450 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 CACTIN-AS1Q8N1I8 211 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC5A8Q8N695 610 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 OR5L2Q8NGL0 311 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 C12orf43Q96C57 262 aaKnown RBP8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 HSPBAP1Q96EW2 488 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PINK1Q9BXM7 581 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 ENKD1Q9H0I2 346 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC13A4Q9UKG4 626 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 BAG5Q9UL15 447 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF232Q9UNY5 417 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 CFL2Q9Y281 166 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 ENPP4Q9Y6X5 453 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 FREM1Q5H8C1 2179 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 A0A1B0GWA3 101 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 OR6C70A6NIJ9 312 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 OR6C76A6NM76 312 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 H3BML4 177 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 TNFRSF11BO00300 401 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 TO15178 435 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF264O43296 627 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 EFNA2O43921 213 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GADD45GO95257 159 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GASTP01350 101 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 TBXA2RP21731 343 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 ELAVL4P26378 380 aaKnown RBP8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PRKAR1BP31321 381 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 HLCSP50747 726 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PNLIPRP2P54317 469 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GAS1P54826 345 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 CXADRP78310 365 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 BIKQ13323 160 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PMS2P3Q13401 168 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 C19orf48Q6RUI8 117 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GALNTL5Q7Z4T8 443 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 OFCC1Q8IZS5 231 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 TAGAPQ8N103 731 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GHDCQ8N2G8 530 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PSD4Q8NDX1 1056 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms