RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 EIF1AXP47813 144 aaKnown RBP13.14□□□□□ -0.31
SGCE-204ENST00000428696 LHX2P50458 406 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 PER3P56645 1201 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 CLDN20P56880 219 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 PCBP3P57721 371 aaKnown RBP13.14□□□□□ -0.31
SGCE-204ENST00000428696 EEFSECP57772 596 aaKnown RBP13.14□□□□□ -0.31
SGCE-204ENST00000428696 NCALDP61601 193 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 TMEM176BQ3YBM2 270 aaPredicted RBP13.14□□□□□ -0.31
SGCE-204ENST00000428696 NHSL2Q5HYW2 709 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 C1orf185Q5T7R7 199 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 C8orf82Q6P1X6 216 aaPredicted RBP13.14□□□□□ -0.31
SGCE-204ENST00000428696 PLXDC2Q6UX71 529 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 B3GNT6Q6ZMB0 384 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 RINLQ6ZS11 566 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 FAM156AQ8NDB6 213 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 FAM71CQ8NEG0 241 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 PINK1Q9BXM7 581 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 ACER3Q9NUN7 267 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 EGFL7Q9UHF1 273 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 ERRFI1Q9UJM3 462 aaPredicted RBP13.14□□□□□ -0.31
SGCE-204ENST00000428696 MEMO1Q9Y316 297 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 SH3GLB1Q9Y371 365 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 AP4B1Q9Y6B7 739 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 RELNP78509 3460 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 FREM3P0C091 2139 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 DNAJC13O75165 2243 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 CXCR6O00574 342 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 ADAM11O75078 769 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 WDR1O75083 606 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 UBOX5O94941 541 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 ZNF682O95780 498 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 CPN1P15169 458 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 ZNF17P17021 662 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 SLC7A1P30825 629 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 KDELR2P33947 212 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 RGS8P57771 180 aaPredicted RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 PLAURQ03405 335 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 EPS8Q12929 822 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 VEZF1Q14119 521 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 SF3B4Q15427 424 aaKnown RBP eCLIP13.13□□□□□ -0.31
SGCE-204ENST00000428696 DUSP7Q16829 419 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 DHRS4L2Q6PKH6 230 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 PLEKHM3Q6ZWE6 761 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 P4HA3Q7Z4N8 544 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 PGAM4Q8N0Y7 254 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 RPRMLQ8N4K4 120 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 RBM15BQ8NDT2 890 aaKnown RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 BHLHE22Q8NFJ8 381 aaPredicted RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 TNIP2Q8NFZ5 429 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 OR52E4Q8NGH9 312 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 ST8SIA1Q92185 356 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 PROX1Q92786 737 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 FAM162AQ96A26 154 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 TAMM41Q96BW9 452 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 MRGPRX4Q96LA9 322 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 TUBA1CQ9BQE3 449 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 PRRG4Q9BZD6 226 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 CTPS2Q9NRF8 586 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 TMEM181Q9P2C4 612 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 CHST2Q9Y4C5 530 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 MED12Q93074 2177 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 E9PLN8 166 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 M0R3H8 397 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 TNFSF11O14788 317 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 T-ENOLP0DO92 83 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 CXCR1P25024 350 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 TACR3P29371 465 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 ACAA2P42765 397 aaKnown RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 SUCLG1P53597 346 aaKnown RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 CLDN15P56746 228 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 RPS3AP61247 264 aaKnown RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 RAC1P63000 192 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 BCL2A1Q16548 175 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 CYBRD1Q53TN4 286 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 SAMD4BQ5PRF9 694 aaKnown RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 HBMQ6B0K9 141 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 TMEM211Q6ICI0 200 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 GRINAQ7Z429 371 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 COMTD1Q86VU5 262 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 LSRQ86X29 649 aaPredicted RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 GRAMD2AQ8IUY3 354 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 FAM26EQ8N5C1 309 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 VKORC1Q9BQB6 163 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 RSPO3Q9BXY4 272 aaPredicted RBP13.13□□□□□ -0.31
SGCE-204ENST00000428696 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 SELENONQ9NZV5 590 aa13.13□□□□□ -0.31
SGCE-204ENST00000428696 PCNX3Q9H6A9 2034 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 GCN1Q92616 2671 aaKnown RBP13.12□□□□□ -0.31
SGCE-204ENST00000428696 TMED7-TICAM2A0A0A6YYA0 188 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 C7orf72A4D263 438 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 GJE1A6NN92 205 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 CLCA1A8K7I4 914 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 EFNA2O43921 213 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 ZG16O60844 167 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 DNAJA2O60884 412 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 ZNF708P17019 499 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 TNFRSF1BP20333 461 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 ADH6P28332 368 aa13.12□□□□□ -0.31
SGCE-204ENST00000428696 APOBEC1P41238 236 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms