RNA–Protein interactions for RNA: ENST00000428585.5

CARF-208, Transcript of calcium responsive transcription factor, human

TSL 2 BASIC

Gene CARF, Length 2,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARF-208	ENST00000428585	OR10A2	Q9H208	303 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PLSCR3	Q9NRY6	295 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	GKN1	Q9NS71	199 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	TMEM216	Q9P0N5	145 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	AGO1	Q9UL18	857 aa	Known RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	STAP1	Q9ULZ2	295 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	OTOL1	A6NHN0	477 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	DRGX	A6NNA5	263 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585		F8W036	122 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PDXK	O00764	312 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	HOXA3	O43365	443 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PRAF2	O60831	178 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ZNF780A	O75290	641 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	CLN5	O75503	358 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	UPK1B	O75841	260 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	APOC1	P02654	83 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	HPX	P02790	462 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ALPI	P09923	528 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	TRAPPC2	P0DI81	140 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	TRAPPC2B	P0DI82	140 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PSKH1	P11801	424 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PROZ	P22891	400 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	YWHAQ	P27348	245 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	SPAM1	P38567	509 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	CDX1	P47902	265 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PPT1	P50897	306 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	SLC18A2	Q05940	514 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	INCA1	Q0VD86	236 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PMPCA	Q10713	525 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	DMP1	Q13316	513 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	NAE1	Q13564	534 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	SIX1	Q15475	284 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ZNF181	Q2M3W8	571 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	POM121L1P	Q3SYA9	428 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ARL13A	Q5H913	290 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	TSTD2	Q5T7W7	516 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	AGBL4	Q5VU57	503 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PLCXD3	Q63HM9	321 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	FBXO42	Q6P3S6	717 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	CBLN3	Q6UW01	205 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	BTNL8	Q6UX41	500 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	LINC00523	Q86TU6	105 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	HORMAD1	Q86X24	394 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ZSWIM9	Q86XI8	627 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	SNX29P2	Q8IUI4	249 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	FOXRED2	Q8IWF2	684 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	MICU2	Q8IYU8	434 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	CCDC185	Q8N715	623 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	TMEM35B	Q8NCS4	154 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ZFP90	Q8TF47	636 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	SNAPC3	Q92966	411 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	TMEM143	Q96AN5	459 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	CSF3R	Q99062	836 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ACOX2	Q99424	681 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	SYT3	Q9BQG1	590 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	CHRDL1	Q9BU40	450 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	WWTR1	Q9GZV5	400 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	GAN	Q9H2C0	597 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PPA2	Q9H2U2	334 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	GEMIN7	Q9H840	131 aa	Known RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	DDX28	Q9NUL7	540 aa	Known RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	WRAP73	Q9P2S5	460 aa	Predicted RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	ERVK-18	Q9QC07	812 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	COPS7A	Q9UBW8	275 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	CTSF	Q9UBX1	484 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	STOML2	Q9UJZ1	356 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	PRPF19	Q9UMS4	504 aa	Known RBP	4.23	□□□□□ -1.73
CARF-208	ENST00000428585	FOXJ3	Q9UPW0	622 aa		4.23	□□□□□ -1.73
CARF-208	ENST00000428585	GON4L	Q3T8J9	2241 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	SAGE2P	A6NJ88	616 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585		E5RJQ4	531 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	ABCD4	O14678	606 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	PSMD3	O43242	534 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	TRIAP1	O43715	76 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	LCMT2	O60294	686 aa	Known RBP	4.22	□□□□□ -1.73
CARF-208	ENST00000428585	PRAMEF2	O60811	474 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	PMPCB	O75439	489 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	STC2	O76061	302 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	KLF8	O95600	359 aa	Predicted RBP	4.22	□□□□□ -1.73
CARF-208	ENST00000428585	WDPCP	O95876	746 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	NELFE	P18615	380 aa	Known RBP	4.22	□□□□□ -1.73
CARF-208	ENST00000428585	DPP4	P27487	766 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	RBMS1	P29558	406 aa	Known RBP	4.22	□□□□□ -1.73
CARF-208	ENST00000428585	GK	P32189	559 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	HMGCL	P35914	325 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	GNPDA1	P46926	289 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	CCR4	P51679	360 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	DAOA	P59103	153 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	ERVFRD-1	P60508	538 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	CSNK2A1	P68400	391 aa	Predicted RBP	4.22	□□□□□ -1.73
CARF-208	ENST00000428585	KRR1	Q13601	381 aa	Known RBP	4.22	□□□□□ -1.73
CARF-208	ENST00000428585	PDGFRL	Q15198	375 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	TSC22D1	Q15714	1073 aa		4.22	□□□□□ -1.73
CARF-208	ENST00000428585	SGCA	Q16586	387 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms