RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LUMP51884 338 aaPredicted RBP14.95□□□□□ -0.02
C9orf3-206ENST00000428313 CDH4P55283 916 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 TUSC3Q13454 348 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 ZNF561Q8N587 486 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 BBS1Q8NFJ9 593 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 OR51G2Q8NGK0 314 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 OR4Q3Q8NH05 313 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 NR4A3Q92570 626 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 ORAI3Q9BRQ5 295 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 ASF1BQ9NVP2 202 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 TAS2R10Q9NYW0 307 aa14.95□□□□□ -0.02
C9orf3-206ENST00000428313 LRIT2A6NDA9 550 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 OR2W5A6NFC9 320 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 GPR37O15354 613 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 RB1P06400 928 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 GJA1P17302 382 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 TBXA2RP21731 343 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 ABCD3P28288 659 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 SLC11A2P49281 568 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 LSM11P83369 360 aaKnown RBP eCLIP14.94□□□□□ -0.02
C9orf3-206ENST00000428313 FABP9Q0Z7S8 132 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 NAE1Q13564 534 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 RAB33AQ14088 237 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 UPP1Q16831 310 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 UAP1L1Q3KQV9 507 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 ADCK2Q7Z695 626 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 THOC6Q86W42 341 aaKnown RBP14.94□□□□□ -0.02
C9orf3-206ENST00000428313 ZNF671Q8TAW3 534 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 HMGB4Q8WW32 186 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 CLP1Q92989 425 aaKnown RBP14.94□□□□□ -0.02
C9orf3-206ENST00000428313 NDC1Q9BTX1 674 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 ALX4Q9H161 411 aaPredicted RBP14.94□□□□□ -0.02
C9orf3-206ENST00000428313 TMPRSS5Q9H3S3 457 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 CXorf36Q9H7Y0 433 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 RBPJLQ9UBG7 517 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 PRKAB1Q9Y478 270 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 RHPN2P1A8MT19 583 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 M0R3H8 397 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 GKN3PP0CG01 181 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 ZNF44P15621 663 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 AGAP20933 346 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 PNLIPRP1P54315 467 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 NRG3P56975 720 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 MC1RQ01726 317 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 TWF1Q12792 350 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 PGGHGQ32M88 737 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 KLHL26Q53HC5 615 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 CLEC12AQ5QGZ9 265 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 SPRYD7Q5W111 196 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 OVCH1Q7RTY7 1134 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 OR1J4Q8NGS1 313 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 C16orf78Q8WTQ4 265 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 ARL11Q969Q4 196 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 PGLYRP3Q96LB9 341 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 MARCH2Q9P0N8 246 aa14.94□□□□□ -0.02
C9orf3-206ENST00000428313 WASH3PC4AMC7 463 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 NFKBIEO00221 500 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 MAN2B1O00754 1011 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 SOCS6O14544 535 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 TMEM127O75204 238 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 SH3BGRLO75368 114 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 CLN5O75503 358 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 ARL6IP5O75915 188 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 HOXC4P09017 264 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-206ENST00000428313 PNLIPRP2P54317 469 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 RPS13P62277 151 aaKnown RBP14.93□□□□□ -0.02
C9orf3-206ENST00000428313 TNFAIP8L2Q6P589 184 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-206ENST00000428313 NKAIN4Q8IVV8 208 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 DCUN1D3Q8IWE4 304 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 ZSCAN1Q8NBB4 408 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 C15orf40Q8WUR7 153 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 SKA2Q8WVK7 121 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-206ENST00000428313 WDR77Q9BQA1 342 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-206ENST00000428313 WDR13Q9H1Z4 485 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 TMEM185BQ9H7F4 350 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 ZFYVE1Q9HBF4 777 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 SMCO4Q9NRQ5 59 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 KLK11Q9UBX7 282 aa14.93□□□□□ -0.02
C9orf3-206ENST00000428313 DAPL1A0PJW8 107 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 CASTOR2A6NHX0 329 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 SEPT4O43236 478 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 TXNL1O43396 289 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 LATS1O95835 1130 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 IGHV2-5P01817 119 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 RCC1P18754 421 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 FAUP35544 74 aaKnown RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 RIDAP52758 137 aaKnown RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 AKR1C2P52895 323 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 AKR1C1Q04828 323 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 PON3Q15166 354 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 RAB12Q6IQ22 244 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 FAM199XQ6PEV8 388 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 COMMD6Q7Z4G1 85 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 KLHDC8AQ8IYD2 350 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 CFAP52Q8N1V2 620 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 MUC20Q8N307 709 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 ZFPM2Q8WW38 1151 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 MRPL38Q96DV4 380 aaKnown RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 ZC3H10Q96K80 434 aaKnown RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 SEPT5Q99719 369 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms