RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SLC7A1P30825 629 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 KIR2DL2P43627 348 aaPredicted RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 POLR2JP52435 117 aaKnown RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 AQP5P55064 265 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 EEF1A1P68104 462 aaKnown RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CHRNEQ04844 493 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SELENBP1Q13228 472 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 FGFBP1Q14512 234 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SYPL1Q16563 259 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PDSS1Q5T2R2 415 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 EEF1A1P5Q5VTE0 462 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 FBXW10Q5XX13 1052 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MSANTD1Q6ZTZ1 278 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 LURAP1LQ8IV03 231 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GPR119Q8TDV5 335 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZFP90Q8TF47 636 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 NRGNQ92686 78 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 STARD4Q96DR4 205 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 THOC1Q96FV9 657 aaKnown RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ITCHQ96J02 903 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TRNT1Q96Q11 434 aaKnown RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 THUMPD3Q9BV44 507 aaKnown RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SRXN1Q9BYN0 137 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 LAT2Q9GZY6 243 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CLEC4MQ9H2X3 399 aaPredicted RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PAQR5Q9NXK6 330 aaPredicted RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 DNAJB12Q9NXW2 375 aaKnown RBP8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ITGB1BP2Q9UKP3 347 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PROCRQ9UNN8 238 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SLC35A3Q9Y2D2 325 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 EMC9Q9Y3B6 208 aa8.26□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CACNA1DQ01668 2161 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 KIAA1549Q9HCM3 1950 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 EFNA2O43921 213 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SS18L1O75177 396 aaPredicted RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CTAG2O75638 210 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TGDSO95455 350 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ETFAP13804 333 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ADH6P28332 368 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CCKARP32238 428 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 RYKP34925 604 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PGM1P36871 562 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CRATP43155 626 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 KCNJ5P48544 419 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CTBP2P56545 445 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CARD18P57730 90 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SESN3P58005 492 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TXNL4AP83876 142 aaKnown RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 POU4F3Q15319 338 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GUSBP1Q15486 140 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZNF239Q16600 458 aaKnown RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 EXOC3L2Q2M3D2 409 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TMEM176BQ3YBM2 270 aaPredicted RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SLC2A7Q6PXP3 512 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZNF474Q6S9Z5 364 aaPredicted RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 FAM214BQ7L5A3 538 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 FAM71CQ8NEG0 241 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZNF563Q8TA94 476 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ABHD3Q8WU67 409 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 WDR60Q8WVS4 1066 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 OIT3Q8WWZ8 545 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ROBO4Q8WZ75 1007 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 OSTF1Q92882 214 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ZG16BQ96DA0 208 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GMPPAQ96IJ6 420 aaPredicted RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 CCDC28BQ9BUN5 200 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 POLDIP3Q9BY77 421 aaKnown RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SAP130Q9H0E3 1048 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SLC38A1Q9H2H9 487 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 COQ10BQ9H8M1 238 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 TPT1P8Q9HAU6 139 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 P2RX2Q9UBL9 471 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 LIPT1Q9Y234 373 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 POLQO75417 2590 aa8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PHF3Q92576 2039 aaKnown RBP8.25□□□□□ -1.09
RFX3-AS1-202ENST00000427722 INTS1Q8N201 2190 aaKnown RBP8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 IGHV3-15A0A0B4J1V0 119 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 A0A1W2PNR3 127 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SH3D21A4FU49 640 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 AGAP5A6NIR3 686 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 BCHEP06276 602 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 GUSBP08236 651 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 EPXP11678 715 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 POU2F1P14859 743 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PGCP20142 388 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MVDP53602 400 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 DSTNP60981 165 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 KCNJ10P78508 379 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 PLAURQ03405 335 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 FAM27E3Q08E93 113 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 MERTKQ12866 999 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SQLEQ14534 574 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 SLC25A53Q5H9E4 307 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 RPS26P11Q5JNZ5 115 aaPredicted RBP8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 C3orf33Q6P1S2 294 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 LRRC74BQ6ZQY2 392 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 LSRQ86X29 649 aaPredicted RBP8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 ARFGAP2Q8N6H7 521 aa8.24□□□□□ -1.09
RFX3-AS1-202ENST00000427722 OR6K3Q8NGY3 331 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms