RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 SULT2B1O00204 365 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 CSNK2A1P68400 391 aaPredicted RBP12.87□□□□□ -0.35
PDAP1-202ENST00000426447 MLC1Q15049 377 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 QPRTQ15274 297 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 NDUFAF6Q330K2 333 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 CDC73Q6P1J9 531 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 C3orf33Q6P1S2 294 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 C1orf159Q96HA4 380 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 VRK1Q99986 396 aaPredicted RBP12.87□□□□□ -0.35
PDAP1-202ENST00000426447 CDC42EP4Q9H3Q1 356 aaKnown RBP12.87□□□□□ -0.35
PDAP1-202ENST00000426447 PIGUQ9H490 435 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 GSTO2Q9H4Y5 243 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 REEP4Q9H6H4 257 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 ANKZF1Q9H8Y5 726 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 DUSP22Q9NRW4 184 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
PDAP1-202ENST00000426447 TAS2R16Q9NYV7 291 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 TRAF6Q9Y4K3 522 aa12.87□□□□□ -0.35
PDAP1-202ENST00000426447 FREM1Q5H8C1 2179 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 IGHV4-61A0A0C4DH41 118 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 LOC390937A0A1W2PQ73 354 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 CYP7B1O75881 506 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
PDAP1-202ENST00000426447 EFNA1P20827 205 aaPredicted RBP12.86□□□□□ -0.35
PDAP1-202ENST00000426447 CFPP27918 469 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 DIO1P49895 249 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 ATP12AP54707 1039 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 PHC1P78364 1004 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 CBFBQ13951 182 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
PDAP1-202ENST00000426447 TIGD2Q4W5G0 525 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF385BQ569K4 471 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF540Q8NDQ6 660 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 OR5W2Q8NH69 310 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 ADAMTS15Q8TE58 950 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 MUS81Q96NY9 551 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 STACQ99469 402 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 ADAM19Q9H013 955 aa12.86□□□□□ -0.35
PDAP1-202ENST00000426447 QRSL1Q9H0R6 528 aaKnown RBP12.86□□□□□ -0.35
PDAP1-202ENST00000426447 ACSS1Q9NUB1 689 aaPredicted RBP12.86□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF264O43296 627 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 EIF4E2O60573 245 aaKnown RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 MRPL33O75394 65 aaKnown RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 H6PDO95479 791 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 TFPIP10646 304 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 ITGA2P17301 1181 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 GABRA6Q16445 453 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 SLC25A53Q5H9E4 307 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 DCST2Q5T1A1 773 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 C8orf74Q6P047 294 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 TMPPEQ6ZT21 453 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 MTDHQ86UE4 582 aaKnown RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 LCA5Q86VQ0 697 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 MEX3DQ86XN8 651 aaKnown RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 RELL1Q8IUW5 271 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 ZHX1-C8orf76Q96EF9 292 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 FAM120BQ96EK7 910 aaKnown RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 METTL2AQ96IZ6 378 aaKnown RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 TSSK3Q96PN8 268 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 SORCS2Q96PQ0 1159 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 MYOZ1Q9NP98 299 aaPredicted RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 C1orf109Q9NX04 203 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 UPB1Q9UBR1 384 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 DTNAQ9Y4J8 743 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 SVEP1Q4LDE5 3571 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 YLPM1P49750 1951 aaKnown RBP12.85□□□□□ -0.35
PDAP1-202ENST00000426447 ANK2Q01484 3957 aa12.85□□□□□ -0.35
PDAP1-202ENST00000426447 H3BQF6 201 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 SLC28A1O00337 649 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 GPR171O14626 319 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 TBX19O60806 448 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 UBL4AP11441 157 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF23P17027 643 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 CASQ1P31415 396 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 FRKP42685 505 aaPredicted RBP12.84□□□□□ -0.35
PDAP1-202ENST00000426447 SNRPD2P62316 118 aaKnown RBP12.84□□□□□ -0.35
PDAP1-202ENST00000426447 MERTKQ12866 999 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 KIAA0040Q15053 153 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 PDK3Q15120 406 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 CFAP157Q5JU67 520 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
PDAP1-202ENST00000426447 C9orf135Q5VTT2 229 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 TIFABQ6ZNK6 161 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 SLC46A3Q7Z3Q1 461 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 CLHC1Q8NHS4 586 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 TMEM234Q8WY98 164 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF524Q96C55 264 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 CCDC126Q96EE4 140 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF764Q96H86 408 aaPredicted RBP12.84□□□□□ -0.35
PDAP1-202ENST00000426447 THUMPD3Q9BV44 507 aaKnown RBP12.84□□□□□ -0.35
PDAP1-202ENST00000426447 ACTRT3Q9BYD9 372 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 BAIAP2L1Q9UHR4 511 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 TMEFF2Q9UIK5 374 aaPredicted RBP12.84□□□□□ -0.35
PDAP1-202ENST00000426447 MOKQ9UQ07 419 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 AMDHD2Q9Y303 409 aa12.84□□□□□ -0.35
PDAP1-202ENST00000426447 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms