RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ICAM5Q9UMF0 924 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 HS3ST3B1Q9Y662 390 aa13.91□□□□□ -0.18
ACTB-204ENST00000425660 EP300Q09472 2414 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 A0A1W2PNU3 283 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 HTR3EA5X5Y0 456 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 H3BSA7 217 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 PLD2O14939 933 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 NDUFB5O43674 189 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 SEC14L2O76054 403 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 JMJD7P0C870 316 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 CDK4P11802 303 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 COX6A1P12074 109 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 MST1P26927 711 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 FXYD6P3P58550 94 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 MVKQ03426 396 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 ZNF117Q03924 483 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 TUBA3CQ13748 450 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 C16orf47Q6ZP98 133 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 AHSA2Q719I0 299 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 RNF217Q8TC41 542 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 GGHQ92820 318 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 IL4I1Q96RQ9 567 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 COPS4Q9BT78 406 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 TBL1XR1Q9BZK7 514 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 C12orf10Q9HB07 376 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 TVP23BQ9NYZ1 205 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 PISDQ9UG56 409 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 SIGLEC7Q9Y286 467 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 KIF26BQ2KJY2 2108 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 CCDC187A0A096LP49 1063 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 PMS2P1A4D2B8 440 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 UNC119BA6NIH7 251 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 C9orf172C9J069 976 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 ZNF701M0R085 212 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 KPNA4O00629 521 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 PRKYO43930 277 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 RAB40ALP0C0E4 278 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 PNMTP11086 282 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 PIPP12273 146 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 PTNP21246 168 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 CLDN6P56747 220 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 EXT1Q16394 746 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 MEDAGQ5VYS4 303 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 PLAG1Q6DJT9 500 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 C6orf15Q6UXA7 325 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 ATG4DQ86TL0 474 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 MARCH3Q86UD3 253 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 MISPQ8IVT2 679 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 TCEANCQ8N8B7 351 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 OR2T33Q8NG76 320 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 MYDGFQ969H8 173 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 MUL1Q969V5 352 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 DEPDC7Q96QD5 511 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 PRRX2Q99811 253 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 TSSK6Q9BXA6 273 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 CCDC90BQ9GZT6 254 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 OR52D1Q9H346 318 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 ZBTB20Q9HC78 741 aaPredicted RBP13.9□□□□□ -0.18
ACTB-204ENST00000425660 AMBNQ9NP70 447 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 TBC1D23Q9NUY8 699 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 MED17Q9NVC6 651 aa13.9□□□□□ -0.18
ACTB-204ENST00000425660 ZFHX2Q9C0A1 2572 aaPredicted RBP13.89□□□□□ -0.19
ACTB-204ENST00000425660 HCRTR2O43614 444 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 ENTPD6O75354 484 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 PTP4A3O75365 173 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 DKK1O94907 266 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 IGHEP01854 428 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 MT-ND2P03891 347 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 CDK1P06493 297 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 ACVR2AP27037 513 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 FOLR3P41439 243 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 SLC1A3P43003 542 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 MASP1P48740 699 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 NUDT6P53370 316 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 TRIP6Q15654 476 aaKnown RBP13.89□□□□□ -0.19
ACTB-204ENST00000425660 CNPY1Q3B7I2 92 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 SYT14P1Q58G82 188 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 CLEC12AQ5QGZ9 265 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 SLC30A6Q6NXT4 461 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 LYPD8Q6UX82 237 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 TIPARPQ7Z3E1 657 aaKnown RBP13.89□□□□□ -0.19
ACTB-204ENST00000425660 SLC43A2Q8N370 569 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 SVOPQ8N4V2 548 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 OR4Q3Q8NH05 313 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 TMEM163Q8TC26 289 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 FAR1Q8WVX9 515 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 TTC9Q92623 222 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 HGDQ93099 445 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 ZNF524Q96C55 264 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 ADAM19Q9H013 955 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 GPR83Q9NYM4 423 aa13.89□□□□□ -0.19
ACTB-204ENST00000425660 EFCAB10A6NFE3 127 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 WWP2O00308 870 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 SURF4O15260 269 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 TLX2O43763 284 aaPredicted RBP13.88□□□□□ -0.19
ACTB-204ENST00000425660 RCBTB2O95199 551 aa13.88□□□□□ -0.19
ACTB-204ENST00000425660 TMED10P49755 219 aaKnown RBP13.88□□□□□ -0.19
ACTB-204ENST00000425660 CRYZQ08257 329 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms