RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FBN3Q75N90 2809 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MED12Q93074 2177 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 IGHV4-30-2A0A087WSY4 118 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 IGHV3-15A0A0B4J1V0 119 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 A0A1W2PNR3 127 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SHISA9B4DS77 424 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 C9JVG2 144 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NPIPB8E9PQR5 432 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 M0R1B8 84 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NDUFS8O00217 210 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GPRIN2O60269 458 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NDUFS7O75251 213 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 LYPLA1O75608 230 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 WNT11O96014 354 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CD8AP01732 235 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ERCC1P07992 297 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 APOBEC1P41238 236 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FRKP42685 505 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CLK1P49759 484 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PDLIM4P50479 330 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF83P51522 516 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 RPL38P63173 70 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 QPRTQ15274 297 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CD226Q15762 336 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GALNTL6Q49A17 601 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TIGD2Q4W5G0 525 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SLC25A53Q5H9E4 307 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ATAD3BQ5T9A4 648 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DNM1P46Q6ZS02 220 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ABHD12BQ7Z5M8 362 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR52N5Q8NH56 324 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF775Q96BV0 537 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FAM120BQ96EK7 910 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GIMAP5Q96F15 307 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NAA11Q9BSU3 229 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 INPP5KQ9BT40 448 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 THUMPD3Q9BV44 507 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CXorf36Q9H7Y0 433 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PPCSQ9HAB8 311 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MYOZ1Q9NP98 299 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TAS2R16Q9NYV7 291 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 BAIAP2L1Q9UHR4 511 aa10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 HRNRQ86YZ3 2850 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NSD1Q96L73 2696 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 EXPH5Q8NEV8 1989 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SERINC4A6NH21 518 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 H7C417 338 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 COPEO14579 308 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RIPK2O43353 540 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 STX11O75558 287 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RAD51DO75771 328 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CSTAP01040 98 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 LINC00032P0C843 101 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SDC1P18827 310 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 IGHV1-2P23083 117 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CD40P25942 277 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 DIO1P49895 249 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MERTKQ12866 999 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 IQCCQ4KMZ1 466 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RFTN2Q52LD8 501 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 LIPMQ5VYY2 423 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CLEC6AQ6EIG7 209 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CBLN3Q6UW01 205 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 UGT2A3Q6UWM9 527 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 EIF3MQ7L2H7 374 aaKnown RBP10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ZNF433Q8N7K0 673 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 VPS37AQ8NEZ2 397 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PMM1Q92871 262 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 NPAS1Q99742 590 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PIMREGQ9BSJ6 248 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 LAT2Q9GZY6 243 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 OXSMQ9NWU1 459 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ATP6V1HQ9UI12 483 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 AMDHD2Q9Y303 409 aa10.83□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ZNF469Q96JG9 3925 aaPredicted RBP10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 LOC100289279A0A1B0GTE1 492 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 G3V2L1 256 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 DNPH1O43598 174 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 EFNA2O43921 213 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 EIF1BO60739 113 aaKnown RBP10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 TRIM13O60858 407 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 KRT33AO76009 404 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 THBS1P07996 1170 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PTNP21246 168 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MATN1P21941 496 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SHC1P29353 583 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CRHR1P34998 444 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 HTR3AP46098 478 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PRPS1P60891 318 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 IRX1P78414 480 aaPredicted RBP10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MAD2L1Q13257 205 aaPredicted RBP10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PDE7AQ13946 482 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GPR68Q15743 365 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ATP6AP1LQ52LC2 224 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RNF165Q6ZSG1 346 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C16orf62Q7Z3J2 963 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ZAR1Q86SH2 424 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C17orf78Q8N4C9 275 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms