RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ZNF141Q15928 474 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 TIGD2Q4W5G0 525 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 ARL13AQ5H913 290 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-209ENST00000425239 C6orf136Q5SQH8 315 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 P2RY8Q86VZ1 359 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 GSPT2Q8IYD1 628 aaKnown RBP13.21□□□□□ -0.29
ATG4B-209ENST00000425239 ZNF527Q8NB42 609 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 OR5D16Q8NGK9 328 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 NANOS1Q8WY41 292 aaKnown RBP13.21□□□□□ -0.29
ATG4B-209ENST00000425239 OR7D2Q96RA2 312 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 NMUR2Q9GZQ4 415 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 QRSL1Q9H0R6 528 aaKnown RBP13.21□□□□□ -0.29
ATG4B-209ENST00000425239 YAE1D1Q9NRH1 226 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 SERINC4A6NH21 518 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 OR5H1A6NKK0 313 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 ELOA3DA6NLF2 546 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-209ENST00000425239 GTPBP1O00178 669 aaKnown RBP13.2□□□□□ -0.3
ATG4B-209ENST00000425239 COPEO14579 308 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 ABCD4O14678 606 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 PEX11AO75192 247 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 UGT2B17O75795 530 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 ATP6V1C1P21283 382 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 ALDH3A1P30838 453 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 TTKP33981 857 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 DIO1P49895 249 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 FOXG1P55316 489 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-209ENST00000425239 SESN3P58005 492 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 HBA1P69905 142 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 PLAURQ03405 335 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 TP53BP2Q13625 1128 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 PDK3Q15120 406 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 ELOA3BQ3SY89 546 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 PDZK1Q5T2W1 519 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 TMPPEQ6ZT21 453 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 OLIG3Q7RTU3 272 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 C4orf33Q8N1A6 199 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 TOR1AIP2Q8NFQ8 470 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 ELOA3Q8NG57 546 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 OR56A1Q8NGH5 318 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 SFXN5Q8TD22 340 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 THUMPD3Q9BV44 507 aaKnown RBP13.2□□□□□ -0.3
ATG4B-209ENST00000425239 LAT2Q9GZY6 243 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 SLC25A15Q9Y619 301 aa13.2□□□□□ -0.3
ATG4B-209ENST00000425239 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 A8MV72 311 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-209ENST00000425239 TMEM114B3SHH9 223 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 H3BNH8 94 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 SSX4O60224 188 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 NPHS1O60500 1241 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 BCAS1O75363 584 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-209ENST00000425239 TP53P04637 393 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-209ENST00000425239 UBL4AP11441 157 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 GGT1P19440 569 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 SLC7A1P30825 629 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 CBFBQ13951 182 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 STK11Q15831 433 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 MAPK14Q16539 360 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 C6orf52Q5T4I8 152 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 ABLIM2Q6H8Q1 611 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 B3GLCTQ6Y288 498 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 SSX8Q7RTT4 187 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 GALNT5Q7Z7M9 940 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 MTDHQ86UE4 582 aaKnown RBP13.19□□□□□ -0.3
ATG4B-209ENST00000425239 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-209ENST00000425239 NATD1Q8N6N6 113 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 FAM71CQ8NEG0 241 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
ATG4B-209ENST00000425239 ST8SIA1Q92185 356 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 CHMP6Q96FZ7 201 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 RADILQ96JH8 1075 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 PPP3R2Q96LZ3 170 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 MUS81Q96NY9 551 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 OR5B2Q96R09 309 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 RHOXF2Q9BQY4 288 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 BHLHE41Q9C0J9 482 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-209ENST00000425239 BARX1Q9HBU1 254 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-209ENST00000425239 MKS1Q9NXB0 559 aa13.19□□□□□ -0.3
ATG4B-209ENST00000425239 FAM234BA2RU67 622 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 PDLIM1O00151 329 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 SCN2BO60939 215 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 LYPLA1O75608 230 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-209ENST00000425239 CHEK2O96017 543 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 FESP07332 822 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 PGM1P36871 562 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 HPCAL1P37235 193 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 RPL3P39023 403 aaKnown RBP13.18□□□□□ -0.3
ATG4B-209ENST00000425239 CDH11P55287 796 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 RPS26P62854 115 aaKnown RBP13.18□□□□□ -0.3
ATG4B-209ENST00000425239 H3F3AP84243 136 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 LOXL1Q08397 574 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-209ENST00000425239 SPOCK1Q08629 439 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 NRF1Q16656 503 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 TMEM249Q2WGJ8 235 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 ARHGAP11BQ3KRB8 267 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 LSM12Q3MHD2 195 aaKnown RBP13.18□□□□□ -0.3
ATG4B-209ENST00000425239 AGAP6Q5VW22 663 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 IL23RQ5VWK5 629 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 FBXW9Q5XUX1 488 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms