RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TUBA3EQ6PEY2 450 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 PODNL1Q6PEZ8 512 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 CBLN3Q6UW01 205 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 ZNF730Q6ZMV8 503 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SPACA3Q8IXA5 215 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 ATG16L2Q8NAA4 619 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 OR4K17Q8NGC6 315 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 OR4C15Q8NGM1 316 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 OR1J4Q8NGS1 313 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SLC7A13Q8TCU3 470 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 MAGEE2Q8TD90 523 aaPredicted RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 GNPDA2Q8TDQ7 276 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 ST8SIA1Q92185 356 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 TM9SF4Q92544 642 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SH3YL1Q96HL8 342 aaPredicted RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 TMEM41AQ96HV5 264 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 FEVQ99581 238 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SLC29A1Q99808 456 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 PSD2Q9BQI7 771 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 DSN1Q9H410 356 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 ZNF552Q9H707 407 aaPredicted RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 SERINC1Q9NRX5 453 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 TAS2R10Q9NYW0 307 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 USE1Q9NZ43 259 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 MED11Q9P086 117 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SLC7A7Q9UM01 511 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 MRPS18CQ9Y3D5 142 aaKnown RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 PCDHGB7Q9Y5F8 929 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 A0A087WUJ7 227 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 A0A0B4J2E0 115 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 A0A1B0GWA3 101 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 A0A1B0GX12 115 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 OR5H15A6NDH6 313 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 ELOA3DA6NLF2 546 aaPredicted RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 PDLIM1O00151 329 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 CDC40O60508 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
MDC1-205ENST00000425072 BCAS1O75363 584 aaPredicted RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 CEACAM4O75871 244 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 CCL3P10147 92 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 GSTM3P21266 225 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 PRKACGP22612 351 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 HTR2AP28223 471 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 PEX2P28328 305 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 ADH6P28332 368 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 PTGDSP41222 190 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 RNF144AP50876 292 aaPredicted RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 ZNF41P51814 821 aaPredicted RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 IST1P53990 364 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 ARG2P78540 354 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 FOXD4Q12950 439 aaPredicted RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 PPP1R8Q12972 351 aaKnown RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 TAF11Q15544 211 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 OR1C1Q15619 314 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 ELOA3BQ3SY89 546 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 GLYR1Q49A26 553 aaPredicted RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 ZNF468Q5VIY5 522 aaPredicted RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 TIGD3Q6B0B8 471 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 C1orf94Q6P1W5 598 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 IGFL2Q6UWQ7 119 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 LINC00114Q6XXX2 140 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 MBOAT2Q6ZWT7 520 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 GRINAQ7Z429 371 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 TMEM179BQ7Z7N9 219 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 ZNF454Q8N9F8 522 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 PSD4Q8NDX1 1056 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 ELOA3Q8NG57 546 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 OR10G2Q8NGC3 310 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 TMEM239Q8WW34 195 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 NTNG2Q96CW9 530 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 C5orf34Q96MH7 638 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 FAM173AQ9BQD7 235 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 RTN4RQ9BZR6 473 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 SLC19A3Q9BZV2 496 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.41□□□□□ -0.9
MDC1-205ENST00000425072 GABARAPL1Q9H0R8 117 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 Q9H521 79 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 GALNT9Q9HCQ5 603 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 CTPS2Q9NRF8 586 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 ANKRD10Q9NXR5 420 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 KIF17Q9P2E2 1029 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 TMEM5Q9Y2B1 443 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 KLF13Q9Y2Y9 288 aaPredicted RBP9.41□□□□□ -0.9
MDC1-205ENST00000425072 MED31Q9Y3C7 131 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 LRRC42Q9Y546 428 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 CEP295Q9C0D2 2601 aa9.41□□□□□ -0.9
MDC1-205ENST00000425072 A0A087WUU8 490 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 TRBV4-1A0A0J9YWV2 114 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 K7ENP7 123 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 SOCS2O14508 198 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 OIP5O43482 229 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 TRIM3O75382 744 aaPredicted RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 IGF2P01344 180 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 GASTP01350 101 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 ALPLP05186 524 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 SP1P08047 785 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 RPS6KA3P51812 740 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 POLR2HP52434 150 aaKnown RBP9.4□□□□□ -0.9
MDC1-205ENST00000425072 DLX5P56178 289 aa9.4□□□□□ -0.9
MDC1-205ENST00000425072 DSCR4P56555 118 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms