RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 MRPL2Q5T653 305 aaKnown RBP20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 DHDDSQ86SQ9 333 aa20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 VRK2Q86Y07 508 aa20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 DMRTC2Q8IXT2 367 aaPredicted RBP20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 RNASE6Q93091 150 aaKnown RBP20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 MAL2Q969L2 176 aa20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 RNF122Q9H9V4 155 aa20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 CACYBPQ9HB71 228 aaKnown RBP20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 A4GALTQ9NPC4 353 aa20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 MCTS1Q9ULC4 181 aaKnown RBP20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 MPDZO75970 2070 aa20.04■□□□□ 0.8
PTCHD3P2-201ENST00000424937 TNFSF13O75888 250 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 BMP2P12643 396 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 SLC6A8P48029 635 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 MERTKQ12866 999 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 SNTB1Q13884 538 aaKnown RBP20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 TMEM176BQ3YBM2 270 aaPredicted RBP20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 FBXL19-AS1Q494R0 122 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 GCNT6Q5T4J0 391 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 C3orf33Q6P1S2 294 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 ZNF836Q6ZNA1 936 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 LUZP2Q86TE4 346 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 OR52P1PQ8NH57 321 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 ACER3Q9NUN7 267 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 PACSIN3Q9UKS6 424 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 CORO2BQ9UQ03 480 aa20.03■□□□□ 0.8
PTCHD3P2-201ENST00000424937 C5orf58C9J3I9 102 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 SYT5O00445 386 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 ADAM11O75078 769 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 CRHP06850 196 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 SLC7A1P30825 629 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 CPA2P48052 419 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 VWA1Q6PCB0 445 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 DLEU7Q6UYE1 221 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 PLEKHM3Q6ZWE6 761 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 RETREG3Q86VR2 466 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 ZNF295-AS1Q8N0V1 137 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 C10orf111Q8N326 155 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 TSPEARQ8WU66 669 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 OSTF1Q92882 214 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 CPPED1Q9BRF8 314 aaPredicted RBP20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 PIGMQ9H3S5 423 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 IKZF5Q9H5V7 419 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 JKAMPQ9P055 326 aa20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 ZNF443Q9Y2A4 671 aaPredicted RBP20.02■□□□□ 0.8
PTCHD3P2-201ENST00000424937 ABCA12Q86UK0 2595 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 NOTCH2Q04721 2471 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 A0A0G2JPF8 293 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 EVPLLA8MZ36 301 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 HNRNPCL2B2RXH8 293 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 HNRNPCL3B7ZW38 293 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 AP3D1O14617 1153 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 HNRNPCL1O60812 293 aaKnown RBP20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 SMNDC1O75940 238 aaKnown RBP eCLIP20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 HNRNPCL4P0DMR1 293 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 CARD18P57730 90 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 EEF1A1P68104 462 aaKnown RBP20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 NFYCQ13952 458 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 LARS2Q15031 903 aaKnown RBP20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 ZNF239Q16600 458 aaKnown RBP20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 EEF1A1P5Q5VTE0 462 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 DPP10Q8N608 796 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 NFKBIDQ8NI38 313 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 BBS10Q8TAM1 723 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 SRXN1Q9BYN0 137 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 COQ10BQ9H8M1 238 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 SERINC1Q9NRX5 453 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 RLIMQ9NVW2 624 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 KLHL14Q9P2G3 628 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 FOXD3Q9UJU5 478 aaPredicted RBP20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 CLEC4AQ9UMR7 237 aa20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 ANKHD1Q8IWZ3 2542 aaKnown RBP20.01■□□□□ 0.79
PTCHD3P2-201ENST00000424937 PLGP00747 810 aaPredicted RBP20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 ARAFP10398 606 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 IDH2P48735 452 aaKnown RBP20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 MYBPHQ13203 477 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 RNF220Q5VTB9 566 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 PRAMEF8Q5VWM4 474 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 PRAMEF7Q5VXH5 474 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 GRINAQ7Z429 371 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 CPNE4Q96A23 557 aaPredicted RBP20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 ZNF317Q96PQ6 595 aaPredicted RBP20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 OR5B2Q96R09 309 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 CGREF1Q99674 301 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 RBM24Q9BX46 236 aaKnown RBP20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 TIGARQ9NQ88 270 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 CTPS2Q9NRF8 586 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 MRGBPQ9NV56 204 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 GMEB1Q9Y692 573 aa20■□□□□ 0.79
PTCHD3P2-201ENST00000424937 DCHS2Q6V1P9 2916 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 A0A1W2PNR3 127 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 CDHR4A6H8M9 788 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 CFAP73A6NFT4 308 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 THBS1P07996 1170 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 UQCRBP14927 111 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 SSTR2P30874 369 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 CPOXP36551 454 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 KIR2DL2P43627 348 aaPredicted RBP19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 RUNDC3AQ59EK9 446 aa19.99■□□□□ 0.79
PTCHD3P2-201ENST00000424937 ZNF440Q8IYI8 595 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms