RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 TP53I3Q53FA7 332 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 RPL22L1Q6P5R6 122 aaKnown RBP13.12□□□□□ -0.31
DENND3-202ENST00000424248 ZFAND1Q8TCF1 268 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 ZNF419Q96HQ0 510 aaPredicted RBP13.12□□□□□ -0.31
DENND3-202ENST00000424248 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 POT1Q9NUX5 634 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 OSGIN1Q9UJX0 560 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 TAF1P21675 1872 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 LOXHD1Q8IVV2 1947 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 GAPDHSO14556 408 aaPredicted RBP13.12□□□□□ -0.31
DENND3-202ENST00000424248 CSO75390 466 aaKnown RBP13.12□□□□□ -0.31
DENND3-202ENST00000424248 IMPA1P29218 277 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 ARRB2P32121 409 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 PBX2P40425 430 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 HSD11B2P80365 405 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 LEG1Q6P5S2 330 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 OR14K1Q8NGZ2 314 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 TREX2Q9BQ50 279 aaPredicted RBP13.12□□□□□ -0.31
DENND3-202ENST00000424248 ANKRD19PQ9H560 264 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 ZNF385DQ9H6B1 395 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 METTL17Q9H7H0 456 aaPredicted RBP13.12□□□□□ -0.31
DENND3-202ENST00000424248 ASF1BQ9NVP2 202 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 CA14Q9ULX7 337 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 CORINQ9Y5Q5 1042 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 TRBV4-1A0A0J9YWV2 114 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 TMEM129A0AVI4 362 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 GFRA2O00451 464 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 LALBAP00709 142 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 EIF2S3P41091 472 aaKnown RBP13.12□□□□□ -0.31
DENND3-202ENST00000424248 SGCAQ16586 387 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 TMEM207Q6UWW9 146 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 SLC25A46Q96AG3 418 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 YIPF6Q96EC8 236 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 SLC7A11Q9UPY5 501 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 NPFFR2Q9Y5X5 522 aa13.12□□□□□ -0.31
DENND3-202ENST00000424248 ZNF736B4DX44 427 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 SYT5O00445 386 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 TCRBP04435 133 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 TP53P04637 393 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 PTPN6P29350 595 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 SLC6A11P48066 632 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 CTBSQ01459 385 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 MRPL49Q13405 166 aaKnown RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 DEFB110Q30KQ9 67 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 UBE2NLQ5JXB2 153 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 NXNL2Q5VZ03 156 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 FAM180BQ6P0A1 224 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 SLC35B4Q969S0 331 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 SLC6A5Q9Y345 797 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 MYO10Q9HD67 2058 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 IFNA17P01571 189 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 NFYAP23511 347 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 USP51Q70EK9 711 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 SYNPRQ8TBG9 265 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 BPIFA2Q96DR5 249 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 C4orf36Q96KX1 117 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 ZNF582Q96NG8 517 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 SLC22A12Q96S37 553 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 DOK1Q99704 481 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 ZNF304Q9HCX3 659 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 IL20RAQ9UHF4 553 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 PHIPQ8WWQ0 1821 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 A8MVJ9 347 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 H3BUI4 141 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 CLUP10909 449 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 CR2P20023 1033 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 S100PP25815 95 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 RPS25P62851 125 aaKnown RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 ERVK-25P63136 954 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 RBMS2Q15434 407 aaKnown RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 LEXMQ3ZCV2 418 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 FAM78AQ5JUQ0 283 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 SLCO4C1Q6ZQN7 724 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 HORMAD2Q8N7B1 307 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 ZSCAN4Q8NAM6 433 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 DDIT4LQ96D03 193 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 LMF2Q9BU23 707 aaKnown RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 OBP2AQ9NY56 170 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 RCE1Q9Y256 329 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 GLI3P10071 1580 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 RREB1Q92766 1687 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 H3BSH0 61 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 J3KTA2 159 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 IL33O95760 270 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 GPR75O95800 540 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 RPS19P39019 145 aaKnown RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 TAS2R19P59542 299 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 SPIN3Q5JUX0 258 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 ADAMTSL4Q6UY14 1074 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 ZNF704Q6ZNC4 412 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 MCATQ8IVS2 390 aaKnown RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 THAP3Q8WTV1 239 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 ZMYND19Q96E35 227 aaPredicted RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 OR1F2PQ96R84 312 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 SORBS1Q9BX66 1292 aaKnown RBP13.11□□□□□ -0.31
DENND3-202ENST00000424248 CAMK2AQ9UQM7 478 aa13.11□□□□□ -0.31
DENND3-202ENST00000424248 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
DENND3-202ENST00000424248 RDH16O75452 317 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms