RNA–Protein interactions for RNA: ENST00000423058.6

SCN1A-204, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN1A, Length 8,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-204ENST00000423058 CDK4P11802 303 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 FKBP2P26885 142 aaKnown RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 XCR1P46094 333 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 HTR5AP47898 357 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 CCL11P51671 97 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 DOC2AQ14183 400 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 GK2Q14410 553 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 SLC35B2Q8TB61 432 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF597Q96LX8 424 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 PKP2Q99959 881 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 INPP5EQ9NRR6 644 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 GNG12Q9UBI6 72 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF225Q9UK10 706 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 A0A1B0GV50 99 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF705FA8MVS1 300 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 MSTNO14793 375 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 SPINT2O43291 252 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 NUDT21O43809 227 aaKnown RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 APOA2P02652 100 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF705DP0CH99 300 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF705BP0CI00 300 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 EIF1P41567 113 aaKnown RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 GNB2P62879 340 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 MRPS10P82664 201 aaKnown RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 ASRGL1Q7L266 308 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 MCATQ8IVS2 390 aaKnown RBP6.45□□□□□ -1.38
SCN1A-204ENST00000423058 LRRC18Q8N456 261 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF516Q92618 1163 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 SCAMP4Q969E2 229 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 SLAMF9Q96A28 289 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 MIB2Q96AX9 1013 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 TLCD1Q96CP7 247 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 SLC6A20Q9NP91 592 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 SPHK1Q9NYA1 384 aa6.45□□□□□ -1.38
SCN1A-204ENST00000423058 SULT1B1O43704 296 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 SRPX2O60687 465 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 EIF1BO60739 113 aaKnown RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 SCO1O75880 301 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 NFYAP23511 347 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 IL1R2P27930 398 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 DCTP40126 519 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 CD300LGQ6UXG3 332 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF761Q86XN6 746 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 CCDC28AQ8IWP9 274 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 SLC41A2Q96JW4 573 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 CMTM3Q96MX0 182 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 DCLRE1CQ96SD1 692 aaKnown RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 CCDC106Q9BWC9 280 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 GABRQQ9UN88 632 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 SCN2AQ99250 2005 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 SMIM30A4D0T7 59 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 EME2A4GXA9 379 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF732B4DXR9 585 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 F5H5P2 479 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 FOXD2O60548 495 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 EGFP01133 1207 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 TMEM11P17152 192 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 RPS18P62269 152 aaKnown RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 IL13RA1P78552 427 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 GALNT1Q10472 559 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 SSX2Q16385 188 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 TAZQ16635 292 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 SLC6A19Q695T7 634 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 LRRN4CLQ8ND94 238 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 BEST4Q8NFU0 473 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 ADAMTS16Q8TE57 1224 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 BPIFA2Q96DR5 249 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 PRRC1Q96M27 445 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 OR6C1Q96RD1 312 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 C1orf198Q9H425 327 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 RPH3ALQ9UNE2 315 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 DOT1LQ8TEK3 1739 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 TMEM233B4DJY2 109 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 TSTD3H0UI37 97 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 DVL1O14640 695 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 B4GAT1O43505 415 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 DDAH2O95865 285 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 DVL1P1P54792 670 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 INHBCP55103 352 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 CARD18P57730 90 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 PCLAFQ15004 111 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 UBE2NLQ5JXB2 153 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 UMODL1-AS1Q8N2C9 162 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF583Q96ND8 569 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 NDFIP1Q9BT67 221 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 FKRPQ9H9S5 495 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 RASD1Q9Y272 281 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 DENRO43583 198 aaKnown RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 OR8U8P0C7N1 319 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 SERPINF1P36955 418 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 PBX1P40424 430 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 RPL13AP40429 203 aaKnown RBP6.44□□□□□ -1.38
SCN1A-204ENST00000423058 PLA2G7Q13093 441 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 MYBPHQ13203 477 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 C9orf152Q5JTZ5 239 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 CRTC1Q6UUV9 634 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 TMEM184AQ6ZMB5 413 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 GDPD3Q7L5L3 318 aa6.44□□□□□ -1.38
SCN1A-204ENST00000423058 ZNF679Q8IYX0 411 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms