RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 HSF1Q00613 529 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 TLE1Q04724 770 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 TRAP1Q12931 704 aaKnown RBP15.38■□□□□ 0.05
COL7A1-202ENST00000422991 MTX3Q5HYI7 312 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 CYP2R1Q6VVX0 501 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 VTCN1Q7Z7D3 282 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 CARM1Q86X55 608 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 DHFR2Q86XF0 187 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 CHERPQ8IWX8 916 aaKnown RBP15.38■□□□□ 0.05
COL7A1-202ENST00000422991 FAM86B1Q8N7N1 296 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 OR6T1Q8NGN1 323 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 ZNF563Q8TA94 476 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 VANGL1Q8TAA9 524 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-202ENST00000422991 TMEM234Q8WY98 164 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 MRGPRX4Q96LA9 322 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 SFXN2Q96NB2 322 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 PIGQQ9BRB3 760 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 LDAHQ9H6V9 325 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 SPRR3Q9UBC9 169 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 SLC7A8Q9UHI5 535 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 SLC6A5Q9Y345 797 aa15.38■□□□□ 0.05
COL7A1-202ENST00000422991 RP1L1Q8IWN7 2480 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-202ENST00000422991 AQP7O14520 342 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 TPST2O60704 377 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 FMO6PO60774 539 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 GP1BBP13224 206 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 PSMA4P25789 261 aaKnown RBP15.37■□□□□ 0.05
COL7A1-202ENST00000422991 HTR2AP28223 471 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 KCNC4Q03721 635 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 ZSCAN26Q16670 478 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 NHSL2Q5HYW2 709 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 WBP2NLQ6ICG8 309 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 ARHGAP11AQ6P4F7 1023 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 RANBP3LQ86VV4 465 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-202ENST00000422991 RBM45Q8IUH3 476 aaKnown RBP15.37■□□□□ 0.05
COL7A1-202ENST00000422991 OR5M1Q8NGP8 315 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 GEMIN6Q8WXD5 167 aaKnown RBP15.37■□□□□ 0.05
COL7A1-202ENST00000422991 ZNF559Q9BR84 538 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 EXO5Q9H790 373 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 SH3GLB1Q9Y371 365 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 NBASA2RRP1 2371 aa15.37■□□□□ 0.05
COL7A1-202ENST00000422991 PYCARD-AS1I3L0S3 204 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 PRKD3O94806 890 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 CHMP24386 653 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 ELK4P28324 431 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 ADH6P28332 368 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 GCKP35557 465 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 SLC1A3P43003 542 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 OR1E2P47887 323 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 COPZ1P61923 177 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 IFI44LQ53G44 452 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 DCST1Q5T197 706 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 AAGABQ6PD74 315 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 ENPP6Q6UWR7 440 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 GFRALQ6UXV0 394 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 PLEKHM3Q6ZWE6 761 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 GRINAQ7Z429 371 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 FGD2Q7Z6J4 655 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 CADM2Q8N3J6 435 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 LSMEM1Q8N8F7 131 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 ST6GALNAC3Q8NDV1 305 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 UTP4Q969X6 686 aaKnown RBP15.36■□□□□ 0.05
COL7A1-202ENST00000422991 MIB2Q96AX9 1013 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 PRR14Q9BWN1 585 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 UGT2B28Q9BY64 529 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 TRIM15Q9C019 465 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 TRIM2Q9C040 744 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 POMPQ9Y244 141 aa15.36■□□□□ 0.05
COL7A1-202ENST00000422991 UBR5O95071 2799 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-202ENST00000422991 A0A1B0GTH9 108 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 TCRBV5S2A0A599 114 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 OR14I1A6ND48 311 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 LINC01387J3KSC0 135 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 STAMBPO95630 424 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 ACTL6AO96019 429 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 BMP7P18075 431 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 CRYZQ08257 329 aaKnown RBP15.35■□□□□ 0.05
COL7A1-202ENST00000422991 MERTKQ12866 999 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 FLOT2Q14254 428 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 VASNQ6EMK4 673 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 FKBP9P1Q75LS8 142 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 PHF10Q8WUB8 498 aaKnown RBP15.35■□□□□ 0.05
COL7A1-202ENST00000422991 MCHR1Q99705 422 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 ADAM19Q9H013 955 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 ZNF337Q9Y3M9 751 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 V9GYQ6 96 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 MYO18BQ8IUG5 2567 aa15.35■□□□□ 0.05
COL7A1-202ENST00000422991 ZGRF1Q86YA3 2104 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 A0A1B0GWA3 101 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 ZNHIT1O43257 154 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 EFNA2O43921 213 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 SEMG1P04279 462 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 IFNW1P05000 195 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 IL11P20809 199 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 HTR3AP46098 478 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 LHX2P50458 406 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 POLR2HP52434 150 aaKnown RBP15.34■□□□□ 0.05
COL7A1-202ENST00000422991 OR1Q1Q15612 314 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 DEF8Q6ZN54 512 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 TSPYL5Q86VY4 417 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms