RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-213ENST00000421756 MYL9P24844 172 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 SOX2P48431 317 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 FXYD6P3P58550 94 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 RAB15P59190 212 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF619Q8N2I2 560 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 DNAJC5GQ8N7S2 189 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 OR5J2Q8NH18 312 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 PCNPQ8WW12 178 aaKnown RBP12.34□□□□□ -0.43
MCF2L-213ENST00000421756 TMCO6Q96DC7 493 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 SENP5Q96HI0 755 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ARHGAP9Q9BRR9 750 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 RIIAD1A6NNX1 92 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 C2orf74A8MZ97 194 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 GPANK1O95872 356 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 TNFP01375 233 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 CD3GP09693 182 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ITPKBP27987 946 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.34□□□□□ -0.43
MCF2L-213ENST00000421756 QPRTQ15274 297 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 SLC25A35Q3KQZ1 300 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF362Q5T0B9 420 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-213ENST00000421756 C1orf189Q5VU69 101 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 PRSS45Q7RTY3 260 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-213ENST00000421756 RASD2Q96D21 266 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 DHRS1Q96LJ7 313 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ARHGDIGQ99819 225 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 HLA-DPB1P04440 258 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 NGFRP08138 427 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 HTR3AP46098 478 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 C3orf38Q5JPI3 329 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 AADACL4Q5VUY2 407 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF322Q6U7Q0 402 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-213ENST00000421756 NR2C2APQ86WQ0 139 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF655Q8N720 491 aaPredicted RBP12.34□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF321PQ8N8H1 164 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 FLRT3Q9NZU0 649 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 CA14Q9ULX7 337 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 KIAA1549LQ6ZVL6 1849 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 CDHR4A6H8M9 788 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 C2orf72A6NCS6 295 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ARRDC5A6NEK1 342 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 LANCL1O43813 399 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 PLGP00747 810 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 SNRPBP14678 240 aaKnown RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ELK1P19419 428 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ZNF10P21506 573 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 TMEM201Q5SNT2 666 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 RTL10Q7L3V2 364 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 TIGD4Q8IY51 512 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ZNF511Q8NB15 262 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 OR5W2Q8NH69 310 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 PHOSPHO1Q8TCT1 267 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ZPLD1Q8TCW7 415 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 SFXN5Q8TD22 340 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 SNX33Q8WV41 574 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ELSPBP1Q96BH3 223 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ZNF486Q96H40 463 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 KLHDC3Q9BQ90 382 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 PRSS27Q9BQR3 290 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 FANCMQ8IYD8 2048 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 A0A1B0GTH9 108 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 TVP23AA6NH52 213 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 HCN1O60741 890 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 FPR3P25089 353 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 PRKAR1BP31321 381 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 SFSWAPQ12872 951 aaKnown RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ZSWIM7Q19AV6 140 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 SLC44A3Q8N4M1 653 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 RCBTB1Q8NDN9 531 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 TEAD3Q99594 435 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 TMEM246Q9BRR3 403 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 PIGUQ9H490 435 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 IL20Q9NYY1 176 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 C11orf98E9PRG8 122 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 GTPBP1O00178 669 aaKnown RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 CSTAP01040 98 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 GAS1P54826 345 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 KIR2DS3Q14952 304 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 MLC1Q15049 377 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 TTLL10Q6ZVT0 673 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 KANSL1Q7Z3B3 1105 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 OR2L13Q8N349 312 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 MINDY2Q8NBR6 621 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ZNF671Q8TAW3 534 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 ZDHHC1Q8WTX9 485 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 SMPDL3BQ92485 455 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 PSD2Q9BQI7 771 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 NXF2Q9GZY0 626 aaKnown RBP12.33□□□□□ -0.44
MCF2L-213ENST00000421756 LMAN2LQ9H0V9 348 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 RMI1Q9H9A7 625 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 GALNT9Q9HCQ5 603 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 PILRAQ9UKJ1 303 aa12.33□□□□□ -0.44
MCF2L-213ENST00000421756 POLR1CO15160 346 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms