RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GPR68Q15743 365 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 TAB1Q15750 504 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 TIGD2Q4W5G0 525 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 OR4F3Q6IEY1 312 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 HEPHL1Q6MZM0 1159 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 Q6ZT83 130 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 RAB3IL1Q8TBN0 382 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 TMEM234Q8WY98 164 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 KCNE5Q9UJ90 142 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 ING1Q9UK53 422 aaPredicted RBP15.41■□□□□ 0.06
MSH6-203ENST00000420813 PCDHGB4Q9UN71 923 aa15.41■□□□□ 0.06
MSH6-203ENST00000420813 PLCE1Q9P212 2302 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 IGHV3-15A0A0B4J1V0 119 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 ZNF724A8MTY0 619 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 ZNF814B7Z6K7 855 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 SMAD9O15198 467 aaKnown RBP15.4■□□□□ 0.06
MSH6-203ENST00000420813 UGT2B17O75795 530 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 H6PDO95479 791 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 CSTAP01040 98 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 SERPINE1P05121 402 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 CD3EP07766 207 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 PGCP20142 388 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 RASGEF1BQ0VAM2 473 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 TSC22D1Q15714 1073 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 PDCD2Q16342 344 aaPredicted RBP15.4■□□□□ 0.06
MSH6-203ENST00000420813 AP1ARQ63HQ0 302 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 EIF3MQ7L2H7 374 aaKnown RBP15.4■□□□□ 0.06
MSH6-203ENST00000420813 BHLHA15Q7RTS1 189 aaPredicted RBP15.4■□□□□ 0.06
MSH6-203ENST00000420813 SSX8Q7RTT4 187 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 C16orf62Q7Z3J2 963 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 KIRREL3Q8IZU9 778 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 LILRB1Q8NHL6 650 aaPredicted RBP15.4■□□□□ 0.06
MSH6-203ENST00000420813 SLC25A43Q8WUT9 341 aaPredicted RBP15.4■□□□□ 0.06
MSH6-203ENST00000420813 FBXW5Q969U6 566 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 OR5B2Q96R09 309 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 THUMPD3Q9BV44 507 aaKnown RBP15.4■□□□□ 0.06
MSH6-203ENST00000420813 AKTIPQ9H8T0 292 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 POLE3Q9NRF9 147 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 SERINC1Q9NRX5 453 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 MKLN1Q9UL63 735 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 LAMP3Q9UQV4 416 aa15.4■□□□□ 0.06
MSH6-203ENST00000420813 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.4■□□□□ 0.06
MSH6-203ENST00000420813 CENPVL1A0A0U1RR11 272 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 OVOL3O00110 214 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 BIRC5O15392 142 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 ITM2AO43736 263 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 KIAA0513O60268 411 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 SCN2BO60939 215 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 MYZAPP0CAP1 466 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 SESN3P58005 492 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 CSNK2A1P68400 391 aaPredicted RBP15.39■□□□□ 0.05
MSH6-203ENST00000420813 ETFDHQ16134 617 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 ATAD3BQ5T9A4 648 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 ALKBH2Q6NS38 261 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 WDR93Q6P2C0 686 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 SEZ6L2Q6UXD5 910 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 DNAJC14Q6Y2X3 702 aaPredicted RBP15.39■□□□□ 0.05
MSH6-203ENST00000420813 LRRC34Q8IZ02 419 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 ZNF781Q8N8C0 355 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 FAM71CQ8NEG0 241 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 VPS37AQ8NEZ2 397 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 OR4A15Q8NGL6 344 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 PIWIL2Q8TC59 973 aaKnown RBP15.39■□□□□ 0.05
MSH6-203ENST00000420813 TESCQ96BS2 214 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 PKNOX2Q96KN3 472 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 DPY30Q9C005 99 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 OR51I1Q9H343 314 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 SSU72Q9NP77 194 aaKnown RBP15.39■□□□□ 0.05
MSH6-203ENST00000420813 ACER3Q9NUN7 267 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 SLC35A3Q9Y2D2 325 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 RAP2CQ9Y3L5 183 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 CR1P17927 2039 aa15.39■□□□□ 0.05
MSH6-203ENST00000420813 CHD3Q12873 2000 aaKnown RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 PRSS51A0A1B0GVH4 220 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 CLOCKO15516 846 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 CYP7B1O75881 506 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 DANCRP0C864 163 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 UBTFL6P0CB48 400 aaPredicted RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 UQCRC2P22695 453 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 PGM1P36871 562 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 DIO1P49895 249 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 ABCE1P61221 599 aaKnown RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 MERTKQ12866 999 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 CAPRIN1Q14444 709 aaKnown RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 CHI3L2Q15782 390 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 DPY19L1Q2PZI1 675 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 SYT14P1Q58G82 188 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 ANXA8L1Q5VT79 327 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 TMPPEQ6ZT21 453 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 CLEC4FQ8N1N0 589 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 MREGQ8N565 214 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 ZNF75CPQ92670 426 aaPredicted RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 TRMT61AQ96FX7 289 aaKnown RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 SAP130Q9H0E3 1048 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 QRSL1Q9H0R6 528 aaKnown RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 PRSS50Q9UI38 385 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 WDR45Q9Y484 360 aa15.38■□□□□ 0.05
MSH6-203ENST00000420813 SPIN1Q9Y657 262 aaPredicted RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 HEATR1Q9H583 2144 aaKnown RBP15.38■□□□□ 0.05
MSH6-203ENST00000420813 ABCA1O95477 2261 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms