RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 C17orf51A8MQB3 221 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 ZNF264O43296 627 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 MPZL2O60487 215 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 NADKO95544 446 aaPredicted RBP19.19■□□□□ 0.66
GPC1-202ENST00000420138 MT-ND2P03891 347 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 CDK4P11802 303 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 FUT1P19526 365 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 GP2P55259 537 aaKnown RBP19.19■□□□□ 0.66
GPC1-202ENST00000420138 CTBP2P56545 445 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 FXYD6P3P58550 94 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 PSPHP78330 225 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 MVKQ03426 396 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 HES3Q5TGS1 186 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 TMPRSS11FQ6ZWK6 438 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 CADM2Q8N3J6 435 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 HS6ST2Q96MM7 605 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 DPH1Q9BZG8 443 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 AMBNQ9NP70 447 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 PTRH2Q9Y3E5 179 aaKnown RBP19.19■□□□□ 0.66
GPC1-202ENST00000420138 NPFFR2Q9Y5X5 522 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 OR6C70A6NIJ9 312 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 C9J4A7 227 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 KPNA4O00629 521 aaPredicted RBP19.18■□□□□ 0.66
GPC1-202ENST00000420138 FADS1O60427 444 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 IFI30P13284 250 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 MST1P26927 711 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 RBM34P42696 430 aaKnown RBP19.18■□□□□ 0.66
GPC1-202ENST00000420138 NUDT6P53370 316 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 LIMK1P53667 647 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 TMEM201Q5SNT2 666 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 TIPARPQ7Z3E1 657 aaKnown RBP19.18■□□□□ 0.66
GPC1-202ENST00000420138 MARCH3Q86UD3 253 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 OR2Y1Q8NGV0 311 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 THAP3Q8WTV1 239 aaPredicted RBP19.18■□□□□ 0.66
GPC1-202ENST00000420138 TRUB1Q8WWH5 349 aaKnown RBP19.18■□□□□ 0.66
GPC1-202ENST00000420138 C3orf49Q96BT1 292 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 TAAR9Q96RI9 348 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 IL4I1Q96RQ9 567 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 FUNDC2Q9BWH2 189 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 PISDQ9UG56 409 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 MED31Q9Y3C7 131 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 PRKYO43930 277 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 DLGAP3O95886 979 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 JMJD7P0C870 316 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 MAP2K4P45985 399 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 ZNF117Q03924 483 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 NFATC3Q12968 1075 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 ASCL5Q7RTU5 278 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 ANKRD13BQ86YJ7 626 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 CLDN22Q8N7P3 220 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 GGHQ92820 318 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 BPIFA2Q96DR5 249 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 DDA1Q9BW61 102 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 POLDIP3Q9BY77 421 aaKnown RBP19.18■□□□□ 0.66
GPC1-202ENST00000420138 LAT2Q9GZY6 243 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 ZBTB20Q9HC78 741 aaPredicted RBP19.18■□□□□ 0.66
GPC1-202ENST00000420138 KRCC1Q9NPI7 259 aaPredicted RBP19.18■□□□□ 0.66
GPC1-202ENST00000420138 TVP23BQ9NYZ1 205 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 HS3ST3B1Q9Y662 390 aa19.18■□□□□ 0.66
GPC1-202ENST00000420138 CFAP54Q96N23 3096 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 A0A087WUJ7 227 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 IGHV1-45A0A0A0MS14 117 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 C9orf172C9J069 976 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 PPM1BO75688 479 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 SMSP52788 366 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 SLC27A4Q6P1M0 643 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 CASP12Q6UXS9 341 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 AHSA2Q719I0 299 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 TCEANCQ8N8B7 351 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 OR8J1Q8NGP2 316 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 OR4Q3Q8NH05 313 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 TEX47Q8TBZ9 253 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 ELP5Q8TE02 316 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 ZPBPQ9BS86 351 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 ENPP5Q9UJA9 477 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 CDH10Q9Y6N8 788 aa19.17■□□□□ 0.66
GPC1-202ENST00000420138 SPAARA0A1B0GVQ0 90 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 SH3D21A4FU49 640 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 CLCA1A8K7I4 914 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 GTPBP1O00178 669 aaKnown RBP19.16■□□□□ 0.66
GPC1-202ENST00000420138 WWP2O00308 870 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 ENTPD6O75354 484 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 ACVR2AP27037 513 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 MASP1P48740 699 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 PCYT1AP49585 367 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 SYT6Q5T7P8 510 aaPredicted RBP19.16■□□□□ 0.66
GPC1-202ENST00000420138 DNAJA4Q8WW22 397 aaPredicted RBP19.16■□□□□ 0.66
GPC1-202ENST00000420138 IMMP1LQ96LU5 166 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 CCDC187A0A096LP49 1063 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 UNC119BA6NIH7 251 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 ZFAND5O76080 213 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 FTH1P19P0C7X4 201 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 COX6A1P12074 109 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 EVI2BP34910 448 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 NRG3P56975 720 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 EIF3IQ13347 325 aaKnown RBP19.16■□□□□ 0.66
GPC1-202ENST00000420138 CLEC12AQ5QGZ9 265 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 LYPD8Q6UX82 237 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 CCDC81Q6ZN84 652 aa19.16■□□□□ 0.66
GPC1-202ENST00000420138 BCDIN3DQ7Z5W3 292 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms