RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PDE7AQ13946 482 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 NDUFAF6Q330K2 333 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 FBXW9Q5XUX1 488 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 SZRD1Q7Z422 152 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 GALNT5Q7Z7M9 940 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 LCA5Q86VQ0 697 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 SLC22A9Q8IVM8 553 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 ZNF100Q8IYN0 542 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 ZNF527Q8NB42 609 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 C1orf159Q96HA4 380 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 METTL2AQ96IZ6 378 aaKnown RBP8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 FCRL1Q96LA6 429 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 STACQ99469 402 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 CCT7Q99832 543 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 PIMREGQ9BSJ6 248 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 IQCGQ9H095 443 aaKnown RBP8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 MID1IP1Q9NPA3 183 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 SIRT3Q9NTG7 399 aaPredicted RBP8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 ACSS1Q9NUB1 689 aaPredicted RBP8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 GIN1Q9NXP7 522 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 TAS2R16Q9NYV7 291 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 MEGF8Q7Z7M0 2845 aa8.95□□□□□ -0.98
TNFAIP3-202ENST00000420009 NPIPA5A0A0B4J1W7 369 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 A0A1W2PR80 420 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 CIB4A0PJX0 185 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 ESPNB1AK53 854 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 NPIPA7E9PJI5 369 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 POC1B-GALNT4F8VUJ3 575 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 H3BNH8 94 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 M0R1B8 84 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 PDLIM1O00151 329 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 SPRY1O43609 319 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 TCF21O43680 179 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 DNAJA2O60884 412 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 SNRPAP09012 282 aaKnown RBP8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 NPIPA8P0DM63 369 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 PRPH2P23942 346 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 CFPP27918 469 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 PHC1P78364 1004 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 SLC7A5Q01650 507 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 CHRNEQ04844 493 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 PDK3Q15120 406 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 QPRTQ15274 297 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 GABRA6Q16445 453 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 SWI5Q1ZZU3 235 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 MST1LQ2TV78 715 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 CR1LQ2VPA4 569 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 LRIG3Q6UXM1 1119 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 TIFABQ6ZNK6 161 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 ZNF572Q7Z3I7 529 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 DEPDC4Q8N2C3 294 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 WDR31Q8NA23 367 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 OR5W2Q8NH69 310 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 JADE3Q92613 823 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 CDS1Q92903 461 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 PPCDCQ96CD2 204 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 FAM120BQ96EK7 910 aaKnown RBP8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 MUS81Q96NY9 551 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 SORCS2Q96PQ0 1159 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 OR5B2Q96R09 309 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 SOX7Q9BT81 388 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 HOXD1Q9GZZ0 328 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 PIGUQ9H490 435 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 REEP4Q9H6H4 257 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 ANKZF1Q9H8Y5 726 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 TNFRSF12AQ9NP84 129 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 RRAGDQ9NQL2 400 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 EMC3Q9P0I2 261 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 TRAF6Q9Y4K3 522 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 FKBP7Q9Y680 259 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 PMF1-BGLAPU3KQ54 211 aa8.94□□□□□ -0.98
TNFAIP3-202ENST00000420009 LOC390937A0A1W2PQ73 354 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 ZNF716A6NP11 495 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 H3BQF6 201 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 KIAA0513O60268 411 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 TGFAP01135 160 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 HMGN2P05204 90 aaKnown RBP8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 ITGA5P08648 1049 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 ZNF23P17027 643 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 ITGA2P17301 1181 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 SDC1P18827 310 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 ATP6V1C1P21283 382 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 APOBEC3AP31941 199 aaPredicted RBP8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 NTF4P34130 210 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 DIO1P49895 249 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 ATP12AP54707 1039 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 FOXG1P55316 489 aaPredicted RBP8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 SLC25A3Q00325 362 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 LASP1Q14847 261 aaKnown RBP8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 OR7E24Q6IFN5 339 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 CDC73Q6P1J9 531 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 TMPPEQ6ZT21 453 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 UBE2J2Q8N2K1 259 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 C17orf78Q8N4C9 275 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 C1orf162Q8NEQ5 155 aaPredicted RBP8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 TOR1AIP2Q8NFQ8 470 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 APH1AQ96BI3 265 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 TRMOQ9BU70 441 aa8.93□□□□□ -0.98
TNFAIP3-202ENST00000420009 ADAM19Q9H013 955 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms