RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DCST1Q5T197 706 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 C1orf185Q5T7R7 199 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 AGBL2Q5U5Z8 902 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 TMEM211Q6ICI0 200 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 MFSD12Q6NUT3 480 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF529Q6P280 563 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 SEM1Q6ZVN7 128 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 CAMKMTQ7Z624 323 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 YRDCQ86U90 279 aaKnown RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PLCZ1Q86YW0 608 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 CCDC71Q8IV32 467 aaPredicted RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 ULK2Q8IYT8 1036 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 LRRC34Q8IZ02 419 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 NATD1Q8N6N6 113 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 CDRT4Q8N9R6 151 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 FAM83FQ8NEG4 500 aaPredicted RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 CEP70Q8NHQ1 597 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PSMA8Q8TAA3 256 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 RAB3IL1Q8TBN0 382 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 GPR151Q8TDV0 419 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 CA5BP1Q8WTZ4 195 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 OR5P2Q8WZ92 322 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PIK3R3Q92569 461 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 SLC9A6Q92581 669 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 RND1Q92730 232 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 COQ8BQ96D53 544 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 OTUB1Q96FW1 271 aaPredicted RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 RMND5BQ96G75 393 aaPredicted RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PRPF18Q99633 342 aaKnown RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 TTYH2Q9BSA4 534 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 C1orf43Q9BWL3 253 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 UGT2B28Q9BY64 529 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 OR2B2Q9GZK3 357 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 C3orf14Q9HBI5 128 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 ZCCHC3Q9NUD5 404 aaKnown RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 FAM120CQ9NX05 1096 aaKnown RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 ALKBH4Q9NXW9 302 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 COQ3Q9NZJ6 369 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 FBXL2Q9UKC9 423 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 MRTO4Q9UKD2 239 aaKnown RBP6.27□□□□□ -1.41
HMGN1-205ENST00000419378 ABCG2Q9UNQ0 655 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 SLC6A5Q9Y345 797 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PCDHGB3Q9Y5G1 929 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 SNX8Q9Y5X2 465 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 MED12Q93074 2177 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 PKDREJQ9NTG1 2253 aa6.27□□□□□ -1.41
HMGN1-205ENST00000419378 APCP25054 2843 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 SDHDO14521 159 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 HNRNPRO43390 633 aaKnown RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 UTS2O95399 124 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 ACTL6AO96019 429 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 PLATP00750 562 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 HMGN2P05204 90 aaKnown RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 ALOX5P09917 674 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 GABRA1P14867 456 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 LBPP18428 481 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 PEX2P28328 305 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 CHRNB4P30926 498 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 PTGER4P35408 488 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 MSX2P35548 267 aaPredicted RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 GCKP35557 465 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 PRIM2P49643 509 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 PSMD4P55036 377 aaKnown RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 CLRN1P58418 232 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 STX5Q13190 355 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 LASP1Q14847 261 aaKnown RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 GRAMD1BQ3KR37 738 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 SPDYE7PQ495Y7 208 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 ACSF3Q4G176 576 aaPredicted RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 ATG16L1Q676U5 607 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 SP5Q6BEB4 398 aaPredicted RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 OR5M10Q6IEU7 315 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 OR4F3Q6IEY1 312 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 ZCCHC12Q6PEW1 402 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 GALNT10Q86SR1 603 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 IFNEQ86WN2 208 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 FAM90A1Q86YD7 464 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 CLECL1Q8IZS7 167 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 COX18Q8N8Q8 333 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 SLC16A11Q8NCK7 471 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 OR4K17Q8NGC6 315 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 OR56A1Q8NGH5 318 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 OR14L1PQ8NHC6 308 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 SFXN5Q8TD22 340 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 ASB5Q8WWX0 329 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 LRTOMTQ8WZ04 291 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 CDS1Q92903 461 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 ABTB1Q969K4 478 aaPredicted RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 C16orf58Q96GQ5 468 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 TIMP4Q99727 224 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 CPPED1Q9BRF8 314 aaPredicted RBP6.26□□□□□ -1.41
HMGN1-205ENST00000419378 DUSP26Q9BV47 211 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 RTN4RQ9BZR6 473 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 CXorf36Q9H7Y0 433 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 MEAF6Q9HAF1 191 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 CHST11Q9NPF2 352 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 THAP1Q9NVV9 213 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 TAS2R10Q9NYW0 307 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 MARCOQ9UEW3 520 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms