RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MAGIXQ9H6Y5 334 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 NCKAP5O14513 1909 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 TRAPPC13A5PLN9 417 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 LINC01387J3KSC0 135 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 FAAHO00519 579 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 SEC14L5O43304 696 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 HCN1O60741 890 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 FMO6PO60774 539 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 BCAS1O75363 584 aaPredicted RBP7.68□□□□□ -1.18
TRIM48-201ENST00000417545 GLSO94925 669 aaPredicted RBP7.68□□□□□ -1.18
TRIM48-201ENST00000417545 HPNP05981 417 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 RAP2AP10114 183 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 PNMTP11086 282 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 PEPDP12955 493 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 PRG2P13727 222 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 ABOP16442 354 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 PRKCAP17252 672 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 TACR3P29371 465 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 APOBEC1P41238 236 aaKnown RBP7.68□□□□□ -1.18
TRIM48-201ENST00000417545 SLC1A3P43003 542 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 CRYBA2P53672 197 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 SESN3P58005 492 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 SMIM11AP58511 58 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 ST3GAL3Q11203 375 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 FOXO1Q12778 655 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 SELENBP1Q13228 472 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 TOMM34Q15785 309 aaPredicted RBP7.68□□□□□ -1.18
TRIM48-201ENST00000417545 HYAL4Q2M3T9 481 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 GLYR1Q49A26 553 aaPredicted RBP7.68□□□□□ -1.18
TRIM48-201ENST00000417545 FGD3Q5JSP0 725 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 C3orf33Q6P1S2 294 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 ULK3Q6PHR2 472 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 GFRALQ6UXV0 394 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 LACC1Q8IV20 430 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 UBQLNLQ8IYU4 475 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 MEIOBQ8N635 442 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 FAM86B1Q8N7N1 296 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 OR5M1Q8NGP8 315 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 CPT1CQ8TCG5 803 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 SARAFQ96BY9 339 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 DDIT4LQ96D03 193 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 SLC41A3Q96GZ6 507 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 PRRC1Q96M27 445 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 TAAR6Q96RI8 345 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF347Q96SE7 839 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 KRCC1Q9NPI7 259 aaPredicted RBP7.68□□□□□ -1.18
TRIM48-201ENST00000417545 ACER3Q9NUN7 267 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 C6orf203Q9P0P8 240 aaPredicted RBP7.68□□□□□ -1.18
TRIM48-201ENST00000417545 PRDM4Q9UKN5 801 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 ACAD8Q9UKU7 415 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 TMCC3Q9ULS5 477 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 CAMK2AQ9UQM7 478 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 SLC6A5Q9Y345 797 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 MRPS18CQ9Y3D5 142 aaKnown RBP7.68□□□□□ -1.18
TRIM48-201ENST00000417545 ENPP4Q9Y6X5 453 aa7.68□□□□□ -1.18
TRIM48-201ENST00000417545 ACACBO00763 2458 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 CELSR3Q9NYQ7 3312 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TMED7-TICAM2A0A0A6YYA0 188 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 A0A1B0GWA3 101 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TCRBV5S2A0A599 114 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 OR2M5A3KFT3 312 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 SHISA8B8ZZ34 492 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 H0Y3Z8 333 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ADAMDEC1O15204 470 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 CHP2O43745 196 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 SUSD5O60279 629 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TPST2O60704 377 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 E2F6O75461 281 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 DIRAS1O95057 198 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 OR5F1O95221 314 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 GADD45GO95257 159 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 CST1P01037 141 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 MT-ND1P03886 318 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 CELA3AP09093 270 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 FCGR1AP12314 374 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 RHCEP18577 417 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ELK4P28324 431 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ADH6P28332 368 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 SFTPDP35247 375 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ACAA2P42765 397 aaKnown RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ARHGDIAP52565 204 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF136P52737 540 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 CASP6P55212 293 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 RPS3AP61247 264 aaKnown RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TRAM2Q15035 370 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 KRTCAP3Q53RY4 240 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 WLSQ5T9L3 541 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ZFP1Q6P2D0 407 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ARHGAP11AQ6P4F7 1023 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF613Q6PF04 617 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TTC33Q6PID6 262 aaPredicted RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 RBM45Q8IUH3 476 aaKnown RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 GTPBP8Q8N3Z3 284 aaPredicted RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 C10orf53Q8N6V4 93 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 Q8NA96 180 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 PIK3C3Q8NEB9 887 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 NEIL3Q8TAT5 605 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ADAMTS16Q8TE57 1224 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 PHF10Q8WUB8 498 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms