RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DHRS4L2Q6PKH6 230 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 ARMC8Q8IUR7 673 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 LILRA2Q8N149 483 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 CLIP4Q8N3C7 705 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 RPRMLQ8N4K4 120 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 MARVELD2Q8N4S9 558 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 ASB5Q8WWX0 329 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 UCN2Q96RP3 112 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 NPAS1Q99742 590 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 EVA1AQ9H8M9 152 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 PAQR5Q9NXK6 330 aaPredicted RBP20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 TAGLN3Q9UI15 199 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 SLC13A4Q9UKG4 626 aa20.82■□□□□ 0.92
SMARCB1-205ENST00000417137 NTN1O95631 604 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 IL2RAP01589 272 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 TIMP3P35625 211 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 CLDN20P56880 219 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 PCBP3P57721 371 aaKnown RBP20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 COPZ1P61923 177 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 PLAURQ03405 335 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 MERTKQ12866 999 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 EPS8Q12929 822 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 SELENBP1Q13228 472 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 VEZF1Q14119 521 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 RIPPLY2Q5TAB7 128 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 ESPNLQ6ZVH7 1005 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 GRINAQ7Z429 371 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 BCAS4Q8TDM0 211 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 ITLN2Q8WWU7 325 aaPredicted RBP20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 ZNF583Q96ND8 569 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 KLHL28Q9NXS3 571 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 RELNP78509 3460 aa20.81■□□□□ 0.92
SMARCB1-205ENST00000417137 FLNCQ14315 2725 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 CLCA1A8K7I4 914 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 HSPB2A8KAH6 182 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 M0QX08 132 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 EIF1AYO14602 144 aaKnown RBP20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 FKBP2P26885 142 aaKnown RBP20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 MNAT1P51948 309 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 SUCLG1P53597 346 aaKnown RBP20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 DLX5P56178 289 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 HSPB2Q16082 182 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 SGCBQ16585 318 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 NCCRP1Q6ZVX7 275 aaPredicted RBP20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 PLEKHM3Q6ZWE6 761 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 ADGRE4PQ86SQ3 457 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 SLC15A3Q8IY34 581 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 OR2T12Q8NG77 320 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 SLC26A7Q8TE54 656 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 WNT2BQ93097 391 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 TM9SF2Q99805 663 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 PINK1Q9BXM7 581 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 SPIN1Q9Y657 262 aaPredicted RBP20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 HIVEP3Q5T1R4 2406 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 COL12A1Q99715 3063 aa20.8■□□□□ 0.92
SMARCB1-205ENST00000417137 FAM220BPB1ANY3 271 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 ADAMDEC1O15204 470 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 MFN2O95140 757 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 IFNA14P01570 189 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 GKN3PP0CG01 181 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 CHRNB4P30926 498 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 SLC1A3P43003 542 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 CLDN15P56746 228 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 KRT72Q14CN4 511 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 C3orf33Q6P1S2 294 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 CCDC80Q76M96 950 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 RASSF5Q8WWW0 418 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 ZNF524Q96C55 264 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 SDCCAG3Q96C92 435 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 KLHL15Q96M94 604 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 TMEM185BQ9H7F4 350 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 TIGARQ9NQ88 270 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 CMTM6Q9NX76 183 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 CHST2Q9Y4C5 530 aa20.79■□□□□ 0.92
SMARCB1-205ENST00000417137 MBD3L4A6NDZ8 208 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 MBD3L3A6NE82 208 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 MBD3L5A6NJ08 208 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 CCT8L1PA6NM43 557 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 AP3D1O14617 1153 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 EFNA2O43921 213 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 ADAM11O75078 769 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 OPN1LWP04000 364 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 ACAA2P42765 397 aaKnown RBP20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 MAP2K6P52564 334 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 SLC7A2P52569 658 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 PSME3P61289 254 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 TMEM176BQ3YBM2 270 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 WBP2NLQ6ICG8 309 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 C8orf82Q6P1X6 216 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 P4HA3Q7Z4N8 544 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 GGNQ86UU5 652 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 FITM2Q8N6M3 262 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 ATP6V1C2Q8NEY4 427 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 OR2V1Q8NHB1 315 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 MBD3L2Q8NHZ7 208 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 CA5BP1Q8WTZ4 195 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 SLC25A43Q8WUT9 341 aaPredicted RBP20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 ARL8BQ9NVJ2 186 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 NDE1Q9NXR1 346 aa20.78■□□□□ 0.92
SMARCB1-205ENST00000417137 RNF6Q9Y252 685 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms