RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PROX1Q92786 737 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 NODALQ96S42 347 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 PRR14Q9BWN1 585 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 PINK1Q9BXM7 581 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 OR2B2Q9GZK3 357 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 TOR3AQ9H497 397 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 CDCP1Q9H5V8 836 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 NTN4Q9HB63 628 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 NDUFAF4Q9P032 175 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 MSRB2Q9Y3D2 182 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 PMF1-BGLAPU3KQ54 211 aa14.24□□□□□ -0.13
SHMT2-202ENST00000414700 SPENQ96T58 3664 aaKnown RBP14.23□□□□□ -0.13
SHMT2-202ENST00000414700 PRSS23O95084 383 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 FABP3P05413 133 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 DBIP07108 87 aaKnown RBP14.23□□□□□ -0.13
SHMT2-202ENST00000414700 PRKAR1BP31321 381 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 CHAF1BQ13112 559 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF141Q15928 474 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 NDUFAF6Q330K2 333 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 GATSQ8NAP1 163 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 OR6T1Q8NGN1 323 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 RHOXF1Q8NHV9 184 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 BRIX1Q8TDN6 353 aaKnown RBP14.23□□□□□ -0.13
SHMT2-202ENST00000414700 RASSF5Q8WWW0 418 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 GEMIN6Q8WXD5 167 aaKnown RBP14.23□□□□□ -0.13
SHMT2-202ENST00000414700 PSMF1Q92530 271 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 HTRA1Q92743 480 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 FGF11Q92914 225 aa14.23□□□□□ -0.13
SHMT2-202ENST00000414700 CDHR4A6H8M9 788 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 A6NL46 340 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 EFSO43281 561 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 TPST2O60704 377 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 THBS1P07996 1170 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 GUSBP08236 651 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 ICAM2P13598 275 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 KRT20P35900 424 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 SOX3P41225 446 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 ID4P47928 161 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 IST1P53990 364 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 PNLIPRP2P54317 469 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 LARS2Q15031 903 aaKnown RBP14.22□□□□□ -0.13
SHMT2-202ENST00000414700 CD226Q15762 336 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF181Q2M3W8 571 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 TMEM236Q5W0B7 351 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 RPS19BP1Q86WX3 136 aaKnown RBP14.22□□□□□ -0.13
SHMT2-202ENST00000414700 LYSMD2Q8IV50 215 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF555Q8NEP9 628 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 THOC3Q96J01 351 aaKnown RBP14.22□□□□□ -0.13
SHMT2-202ENST00000414700 OSBPL10Q9BXB5 764 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 UBQLN4Q9NRR5 601 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 FAM118AQ9NWS6 357 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 SCO2O43819 266 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 IDH3BO43837 385 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 ADAM11O75078 769 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 PPM1BO75688 479 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 CST1P01037 141 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 SERPINA7P05543 415 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 GKN3PP0CG01 181 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 PRG2P13727 222 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 PSMD4P55036 377 aaKnown RBP14.22□□□□□ -0.13
SHMT2-202ENST00000414700 COPZ1P61923 177 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 PIGFQ07326 219 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 NPTX1Q15818 432 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 MEP1AQ16819 746 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 CTU2Q2VPK5 515 aaKnown RBP14.22□□□□□ -0.13
SHMT2-202ENST00000414700 KLHL26Q53HC5 615 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 TAGAPQ8N103 731 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 SVOPQ8N4V2 548 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 FAR1Q8WVX9 515 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 CNOT9Q92600 299 aaKnown RBP14.22□□□□□ -0.13
SHMT2-202ENST00000414700 MBOAT4Q96T53 435 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 DSN1Q9H410 356 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 MARCH7Q9H992 704 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 CTPS2Q9NRF8 586 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 VNN3Q9NY84 501 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 MRTO4Q9UKD2 239 aaKnown RBP14.22□□□□□ -0.13
SHMT2-202ENST00000414700 NTNG1Q9Y2I2 539 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 UGT2A1Q9Y4X1 527 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 PCDHGB1Q9Y5G3 927 aa14.22□□□□□ -0.13
SHMT2-202ENST00000414700 OR6C70A6NIJ9 312 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 SLC1A7O00341 560 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 PTTG1O95997 202 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 FOXD4Q12950 439 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-202ENST00000414700 FGFBP1Q14512 234 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF468Q5VIY5 522 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-202ENST00000414700 BICRALQ6AI39 1079 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 TUBA3EQ6PEY2 450 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 DEF8Q6ZN54 512 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 STK32CQ86UX6 486 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 PMM1Q92871 262 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 SDCCAG3Q96C92 435 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 YIPF6Q96EC8 236 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 TMA7Q9Y2S6 64 aaKnown RBP14.21□□□□□ -0.13
SHMT2-202ENST00000414700 U3KQV3 271 aa14.21□□□□□ -0.13
SHMT2-202ENST00000414700 PRRC2CQ9Y520 2896 aaKnown RBP14.21□□□□□ -0.13
SHMT2-202ENST00000414700 ARGFXA6NJG6 315 aa14.2□□□□□ -0.14
SHMT2-202ENST00000414700 FFAR1O14842 300 aa14.2□□□□□ -0.14
SHMT2-202ENST00000414700 KLK10O43240 276 aa14.2□□□□□ -0.14
SHMT2-202ENST00000414700 IFNW1P05000 195 aa14.2□□□□□ -0.14
SHMT2-202ENST00000414700 NAT1P18440 290 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms