RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 C3orf33Q6P1S2 294 aa13.82□□□□□ -0.2
ACTB-202ENST00000414620 CLEC9AQ6UXN8 241 aa13.82□□□□□ -0.2
ACTB-202ENST00000414620 GABRG1Q8N1C3 465 aa13.82□□□□□ -0.2
ACTB-202ENST00000414620 ANKRD42Q8N9B4 389 aa13.82□□□□□ -0.2
ACTB-202ENST00000414620 ZNF775Q96BV0 537 aaPredicted RBP13.82□□□□□ -0.2
ACTB-202ENST00000414620 ZNF300Q96RE9 604 aaPredicted RBP13.82□□□□□ -0.2
ACTB-202ENST00000414620 LAT2Q9GZY6 243 aa13.82□□□□□ -0.2
ACTB-202ENST00000414620 SSU72Q9NP77 194 aaKnown RBP13.82□□□□□ -0.2
ACTB-202ENST00000414620 EXD2Q9NVH0 621 aa13.82□□□□□ -0.2
ACTB-202ENST00000414620 PRSS50Q9UI38 385 aa13.82□□□□□ -0.2
ACTB-202ENST00000414620 WDR45Q9Y484 360 aa13.82□□□□□ -0.2
ACTB-202ENST00000414620 TRIM64A6NGJ6 449 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 TRIM64BA6NI03 449 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 ANKRD28O15084 1053 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 KIAA0513O60268 411 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 ADAP00813 363 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 YES1P07947 543 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 UQCRC2P22695 453 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 CHI3L1P36222 383 aaPredicted RBP13.81□□□□□ -0.2
ACTB-202ENST00000414620 PTH2RP49190 550 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 NR1H2P55055 460 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 SESN3P58005 492 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 MERTKQ12866 999 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 CAPRIN1Q14444 709 aaKnown RBP13.81□□□□□ -0.2
ACTB-202ENST00000414620 KRTAP21-3Q3LHN1 58 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 FAM174BQ3ZCQ3 159 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 ATAD3BQ5T9A4 648 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 HEPHL1Q6MZM0 1159 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 PLEKHM3Q6ZWE6 761 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 STEAP2Q8NFT2 490 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 RAB3IL1Q8TBN0 382 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 ROPN1LQ96C74 230 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 PSD2Q9BQI7 771 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 SLC35A5Q9BS91 424 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 TACO1Q9BSH4 297 aaKnown RBP13.81□□□□□ -0.2
ACTB-202ENST00000414620 MARCOQ9UEW3 520 aaPredicted RBP13.81□□□□□ -0.2
ACTB-202ENST00000414620 ING1Q9UK53 422 aaPredicted RBP13.81□□□□□ -0.2
ACTB-202ENST00000414620 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
ACTB-202ENST00000414620 ROS1P08922 2347 aa13.81□□□□□ -0.2
ACTB-202ENST00000414620 PRSS51A0A1B0GVH4 220 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 E9PBE3 544 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 SMAD9O15198 467 aaKnown RBP13.8□□□□□ -0.2
ACTB-202ENST00000414620 FESP07332 822 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 ALDOCP09972 364 aaKnown RBP13.8□□□□□ -0.2
ACTB-202ENST00000414620 PGCP20142 388 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 EDNRAP25101 427 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 S100A3P33764 101 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 RYKP34925 604 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 PGM1P36871 562 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 KHKP50053 298 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 CLNS1AP54105 237 aaKnown RBP13.8□□□□□ -0.2
ACTB-202ENST00000414620 RAC3P60763 192 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 UFM1P61960 85 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 RASGEF1BQ0VAM2 473 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 BST1Q10588 318 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 CASP8Q14790 479 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 GPAT3Q53EU6 434 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 SFRP5Q5T4F7 317 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 ANXA8L1Q5VT79 327 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 SAXO2Q658L1 398 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 FRRS1Q6ZNA5 592 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 EIF3MQ7L2H7 374 aaKnown RBP13.8□□□□□ -0.2
ACTB-202ENST00000414620 ATG4DQ86TL0 474 aaPredicted RBP13.8□□□□□ -0.2
ACTB-202ENST00000414620 SLC43A2Q8N370 569 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 ZNF563Q8TA94 476 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 MIPOL1Q8TD10 442 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 TMEM171Q8WVE6 324 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 ST8SIA1Q92185 356 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 AKAP1Q92667 903 aaKnown RBP eCLIP13.8□□□□□ -0.2
ACTB-202ENST00000414620 KISS1RQ969F8 398 aaPredicted RBP13.8□□□□□ -0.2
ACTB-202ENST00000414620 ARL8AQ96BM9 186 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 TESCQ96BS2 214 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 TEX37Q96LM6 180 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 OR10A4Q9H209 315 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 MEAF6Q9HAF1 191 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 KLHL9Q9P2J3 617 aa13.8□□□□□ -0.2
ACTB-202ENST00000414620 PRAMEF27A3QJZ7 478 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 CLDN24A6NM45 220 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 ZNF814B7Z6K7 855 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 ETV2O00321 342 aaPredicted RBP13.79□□□□□ -0.2
ACTB-202ENST00000414620 SDHDO14521 159 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 HS3ST1O14792 307 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 CLOCKO15516 846 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 CYTIPO60759 359 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 LYZL6O75951 148 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 TFPIP10646 304 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 DIO1P49895 249 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 HPCAP84074 193 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 TAB1Q15750 504 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 TNFAIP8L3Q5GJ75 292 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 HHATQ5VTY9 493 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 RNF130Q86XS8 419 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 VPS37AQ8NEZ2 397 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 MGARPQ8TDB4 240 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 TMEM234Q8WY98 164 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 NEUROG1Q92886 237 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 NEURL3Q96EH8 262 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 COX4I2Q96KJ9 171 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 TMEM204Q9BSN7 226 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 INPP5KQ9BT40 448 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms