RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 H7C1Q1 480 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 K7EQS6 105 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF208O43345 1280 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 KIAA0513O60268 411 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 VPS26AO75436 327 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 EGFP01133 1207 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 CD3EP07766 207 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 PSKH1P11801 424 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 LHCGRP22888 699 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 MAPK12P53778 367 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 ENPP2Q13822 863 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 RUNX2Q13950 521 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 QPRTQ15274 297 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 RBBP7Q16576 425 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 C9orf64Q5T6V5 341 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 FAM122BQ7Z309 247 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 KCTD20Q7Z5Y7 419 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 PIM3Q86V86 326 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 AMIGO1Q86WK6 493 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 CCDC36Q8IYA8 594 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 TCTN2Q96GX1 697 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 HRASLS5Q96KN8 279 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 C17orf62Q9BQA9 187 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 NLNQ9BYT8 704 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 PRDM14Q9GZV8 571 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 RNF121Q9H920 327 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 C1orf109Q9NX04 203 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 GLTPQ9NZD2 209 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 VSX1Q9NZR4 365 aaPredicted RBP8.71□□□□□ -1.02
SNHG3-201ENST00000413987 CD84Q9UIB8 345 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 BDP1A6H8Y1 2624 aa8.71□□□□□ -1.02
SNHG3-201ENST00000413987 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 TEX13CA0A0J9YWL9 993 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 A0A1W2PNR3 127 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 A0A1W2PPV4 95 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 LINC00862A6NCI5 91 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 KPNA3O00505 521 aaPredicted RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 TFECO14948 347 aaPredicted RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 EPOP01588 193 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 G6PDP11413 515 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 CCL2P13500 99 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF30P17039 623 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 UQCRC1P31930 480 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 CAMPP49913 170 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF140P52738 457 aaPredicted RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 DGKQP52824 942 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 RPL23AP62750 156 aaKnown RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 SPOCK1Q08629 439 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ABHD18Q0P651 414 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 KIAA0040Q15053 153 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 PLCXD3Q63HM9 321 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 SHISA2Q6UWI4 295 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 GDPD4Q6W3E5 623 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 GDPGP1Q6ZNW5 385 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 RTL4Q6ZR62 310 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 CENPVQ7Z7K6 275 aaPredicted RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ENTHD1Q8IYW4 607 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 CYP4Z2PQ8N1L4 340 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 DNAJC22Q8N4W6 341 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 CADM4Q8NFZ8 388 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 APH1BQ8WW43 257 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ELMO1Q92556 727 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ST6GALNAC6Q969X2 333 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 PPP3R2Q96LZ3 170 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF382Q96SR6 550 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 GPA33Q99795 319 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 P2RY13Q9BPV8 354 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 KATNB1Q9BVA0 655 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 UCK2Q9BZX2 261 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 OPN3Q9H1Y3 402 aaPredicted RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 IL1RAPQ9NPH3 570 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 IL36AQ9UHA7 158 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 UBQLN2Q9UHD9 624 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 CRLS1Q9UJA2 301 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 PCTPQ9UKL6 214 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 SPATA2Q9UM82 520 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 NEUROG3Q9Y4Z2 214 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 SHISA7A6NL88 538 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 E9PQ18 207 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 SEC14L5O43304 696 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 PRICKLE3O43900 615 aaPredicted RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 DPM1O60762 260 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ERN1O75460 977 aaKnown RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 GPX5O75715 221 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 RAB3DO95716 219 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 NRG3P56975 720 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 POU4F2Q12837 409 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 PNLIPRP3Q17RR3 467 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 PLAG1Q6DJT9 500 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 FAM151BQ6UXP7 276 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 TMIGD1Q6UXZ0 262 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF782Q6ZMW2 699 aaPredicted RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 Q6ZSR9 355 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 USP30Q70CQ3 517 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 MED25Q71SY5 747 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 CALHM3Q86XJ0 350 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 PIANPQ8IYJ0 282 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 STX19Q8N4C7 294 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 YIPF7Q8N8F6 280 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF557Q8N988 423 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms