RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ELMO2Q96JJ3 720 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 MAPKAP1Q9BPZ7 522 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 TSSK1BQ9BXA7 367 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 GLT8D2Q9H1C3 349 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 PNO1Q9NRX1 252 aaKnown RBP2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 ANKMY1Q9P2S6 941 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 ATXN10Q9UBB4 475 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 CYTH4Q9UIA0 394 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 CELA1Q9UNI1 258 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 PDE10AQ9Y233 779 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 MTF2Q9Y483 593 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 CARMIL3Q8ND23 1372 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 WDR90Q96KV7 1748 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 CCDC171Q6TFL3 1326 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 SH3TC1Q8TE82 1336 aa2.68□□□□□ -1.98
HMGB1P11-201ENST00000413899 LRRC30A6NM36 301 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 WASH3PC4AMC7 463 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 CABYRO75952 493 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 CIAO1O76071 339 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 IGHV3-23P01764 117 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 GSTT2P0CG29 244 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 GSTT2BP0CG30 244 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 UQCRBP14927 111 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 ZBTB25P24278 435 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 PTBP1P26599 531 aaKnown RBP eCLIP2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 DPP4P27487 766 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 RPA1P27694 616 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 ADORA1P30542 326 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 DEKP35659 375 aaKnown RBP2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 ZNF154Q13106 437 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 EXOSC2Q13868 293 aaKnown RBP2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 DPYSQ14117 519 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 KCNJ11Q14654 390 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 TEX44Q53QW1 395 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 LDLRAP1Q5SW96 308 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 FAM120AOSQ5T036 256 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 WASH2PQ6VEQ5 465 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 TFAP2EQ6VUC0 442 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 RUFY3Q7L099 469 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 HSD11B1LQ7Z5J1 315 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 SERPINA9Q86WD7 417 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 EFCAB13Q8IY85 973 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 STKLD1Q8NE28 680 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 OR52B4Q8NGK2 314 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 OR9A4Q8NGU2 314 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 LINC01006Q8NI28 216 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 UPRTQ96BW1 309 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 VPS39Q96JC1 886 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 VSTM2LQ96N03 204 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 SLC30A2Q9BRI3 323 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 SLC25A51Q9H1U9 297 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 RBM28Q9NW13 759 aaKnown RBP2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 C1orf123Q9NWV4 160 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 IL17CQ9P0M4 197 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 ATP6V1HQ9UI12 483 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 HOOK1Q9UJC3 728 aaKnown RBP2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 SAMD4AQ9UPU9 718 aaKnown RBP2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 CLCA3PQ9Y6N3 262 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 OTOFQ9HC10 1997 aa2.67□□□□□ -1.98
HMGB1P11-201ENST00000413899 COL4A5P29400 1685 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 NID2Q14112 1375 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 ZSCAN5BA6NJL1 495 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 ANKRD30BLA7E2S9 258 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 ERVV-1B6SEH8 477 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 E9PLD3 99 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 WWP2O00308 870 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 OR7A17O14581 309 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 CHRNA1P02708 482 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 HSPB1P04792 205 aaKnown RBP2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 STSP08842 583 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 XRCC1P18887 633 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 MAPK3P27361 379 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 AXLP30530 894 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 CAMLGP49069 296 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 IL1RL1Q01638 556 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 OC90Q02509 493 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 CEBPEQ15744 281 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 PVRIGQ6DKI7 326 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 SMIM5Q71RC9 77 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 MOB1BQ7L9L4 216 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 CBWD2Q8IUF1 395 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 CEND1Q8N111 149 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 C14orf178Q8N769 122 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 OR5AU1Q8NGC0 362 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 ARNTL2Q8WYA1 636 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 MAGEB18Q96M61 343 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 TMEM121Q9BTD3 319 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 FICDQ9BVA6 458 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 UPF3BQ9BZI7 483 aaKnown RBP2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 ECT2Q9H8V3 914 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 ACTR8Q9H981 624 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 COG4Q9H9E3 785 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 VAT1LQ9HCJ6 419 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 NGBQ9NPG2 151 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 YAE1D1Q9NRH1 226 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 CHMP5Q9NZZ3 219 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 MGAT4BQ9UQ53 548 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 AP4B1Q9Y6B7 739 aa2.66□□□□□ -1.98
HMGB1P11-201ENST00000413899 ADAMTS9Q9P2N4 1935 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms