RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 CHMP2AO43633 222 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 EFNA2O43921 213 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 OR2F2O95006 317 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 CCNB1P14635 433 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 XRCC1P18887 633 aaPredicted RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 TUBG1P23258 451 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 BRCC3P46736 316 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 GYG1P46976 350 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 DUSP3P51452 185 aaPredicted RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 NOVA1P51513 510 aaKnown RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 NDST2P52849 883 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 YWHAGP61981 247 aaKnown RBP eCLIP4.24□□□□□ -1.73
LSM5-206ENST00000409987 RAB11AP62491 216 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 PEX6Q13608 980 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 CUL1Q13616 776 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 GK3PQ14409 553 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 NECTIN1Q15223 517 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 MLF2Q15773 248 aaPredicted RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 UBE2V2Q15819 145 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 RAB11BQ15907 218 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 HNRNPA1L2Q32P51 320 aaKnown RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 MOGAT2Q3SYC2 334 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 CYBRD1Q53TN4 286 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 BEND3Q5T5X7 828 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 SLX4IPQ5VYV7 408 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 ACSM5Q6NUN0 579 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 ADAM5Q6NVV9 412 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 SCYL2Q6P3W7 929 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 UQCC3Q6UW78 93 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 GDPGP1Q6ZNW5 385 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 SERPINA9Q86WD7 417 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 TRIML2Q8N7C3 387 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 WDSUB1Q8N9V3 476 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 CHDHQ8NE62 594 aaPredicted RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 OR7G2Q8NG99 324 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 OR10A7Q8NGE5 316 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 OR6F1Q8NGZ6 308 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 C11orf52Q96A22 123 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 OPRPNQ99935 248 aaPredicted RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 SPATA16Q9BXB7 569 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 ILKAPQ9H0C8 392 aaPredicted RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 NXF5Q9H1B4 397 aaKnown RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 PLEKHA3Q9HB20 300 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 MRPS30Q9NP92 439 aaKnown RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 TUBG2Q9NRH3 451 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 C20orf96Q9NUD7 363 aaPredicted RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 NDE1Q9NXR1 346 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 AHSPQ9NZD4 102 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 IL36GQ9NZH8 169 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 GALPQ9UBC7 116 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 PRPF19Q9UMS4 504 aaKnown RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 RASD1Q9Y272 281 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 EXOSC1Q9Y3B2 195 aaKnown RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 PREX1Q8TCU6 1659 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 ZCCHC11Q5TAX3 1644 aaKnown RBP4.24□□□□□ -1.73
LSM5-206ENST00000409987 FANCAO15360 1455 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 NEO1Q92859 1461 aa4.24□□□□□ -1.73
LSM5-206ENST00000409987 AKNAQ7Z591 1439 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 TRBV11-1A0A0K0K1C0 115 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 IQCMA0A1B0GVH7 501 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 TMCO5BA8MYB1 307 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 TM9SF1O15321 606 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 PRKAB2O43741 272 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 RANBP6O60518 1105 aaKnown RBP4.23□□□□□ -1.73
LSM5-206ENST00000409987 GNA14O95837 355 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 SNAI1O95863 264 aaPredicted RBP4.23□□□□□ -1.73
LSM5-206ENST00000409987 ERCC1P07992 297 aaPredicted RBP4.23□□□□□ -1.73
LSM5-206ENST00000409987 STAG3L2P0CL84 134 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 IMPDH1P20839 514 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 RPL13AP40429 203 aaKnown RBP4.23□□□□□ -1.73
LSM5-206ENST00000409987 BDKRB1P46663 353 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 EMDP50402 254 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 BCAP31P51572 246 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 TMEM50BP56557 158 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 ERVK-16P61578 105 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 RBBP4Q09028 425 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 ASPHQ12797 758 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 KIAA0141Q14154 515 aaPredicted RBP4.23□□□□□ -1.73
LSM5-206ENST00000409987 FAM83EQ2M2I3 478 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 METTL11BQ5VVY1 283 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 KCNMB4Q86W47 210 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 SPATA24Q86W54 205 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 TRIM69Q86WT6 500 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 GABRG1Q8N1C3 465 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 TCAIMQ8N3R3 496 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 FGFRL1Q8N441 504 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 DHRSXQ8N5I4 330 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 SDR9C7Q8NEX9 313 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 OR52B6Q8NGF0 335 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 SUN5Q8TC36 379 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 OR1E3Q8WZA6 343 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 NRGNQ92686 78 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 BADQ92934 168 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 SDSLQ96GA7 329 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 PPP1R16AQ96I34 528 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 POM121L2Q96KW2 1035 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 PANX2Q96RD6 677 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 IL4I1Q96RQ9 567 aa4.23□□□□□ -1.73
LSM5-206ENST00000409987 RIOK1Q9BRS2 568 aaKnown RBP4.23□□□□□ -1.73
LSM5-206ENST00000409987 DUSP16Q9BY84 665 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms