RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 M1APQ8TC57 530 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM239Q8WW34 195 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 C8orf44Q96CB5 159 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 HS6ST2Q96MM7 605 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 ADOQ96SZ5 270 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 RTN4RQ9BZR6 473 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 LAT2Q9GZY6 243 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PLCXD1Q9NUJ7 323 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PISDQ9UG56 409 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PTRH2Q9Y3E5 179 aaKnown RBP5.06□□□□□ -1.6
EPHA4-202ENST00000409854 NPFFR2Q9Y5X5 522 aa5.06□□□□□ -1.6
EPHA4-202ENST00000409854 PCNX2A6NKB5 2137 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 EIF4E2O60573 245 aaKnown RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 REM1O75628 298 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 ZFAND5O76080 213 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 IGF2P01344 180 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 JMJD7P0C870 316 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 KRT20P35900 424 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 STAT5AP42229 794 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 RPL5P46777 297 aaKnown RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 NR1H2P55055 460 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 EXT1Q16394 746 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 NDUFAF6Q330K2 333 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM201Q5SNT2 666 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 BROXQ5VW32 411 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 PLAG1Q6DJT9 500 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 DESI1Q6ICB0 168 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 ULK3Q6PHR2 472 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF773Q6PK81 442 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 TMPRSS11FQ6ZWK6 438 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 NRMQ8IXM6 262 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 NLGN4XQ8N0W4 816 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 SLC15A4Q8N697 577 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 CT55Q8WUE5 264 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 FGF11Q92914 225 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 TTC28Q96AY4 2481 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 FAM46AQ96IP4 442 aaKnown RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 SIGLEC11Q96RL6 698 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 MMP25Q9NPA2 562 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 KRCC1Q9NPI7 259 aaPredicted RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 PAK1IP1Q9NWT1 392 aaPredicted RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 FOXJ2Q9P0K8 574 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 PADI1Q9ULC6 663 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 ARPC4-TTLL3A0A0A6YYG9 625 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM238LA0A1B0GVL6 79 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 MPZL2O60487 215 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 MRPS14O60783 128 aaKnown RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 ANGPTL1O95841 491 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 HTR1AP08908 422 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 M6PRP20645 277 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 MST1P26927 711 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 EVI2BP34910 448 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 SLC6A8P48029 635 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 CDH15P55291 814 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 CDC42P60953 191 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 SNRPGP62308 76 aaKnown RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 CSNK2BP67870 215 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 EFNB1P98172 346 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF117Q03924 483 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 SLC25A30Q5SVS4 291 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 FAM69BQ5VUD6 431 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF620Q6ZNG0 422 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 CCDC103Q8IW40 242 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 DNAJA4Q8WW22 397 aaPredicted RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 C3orf49Q96BT1 292 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 DUSP21Q9H596 190 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 POLR1BQ9H9Y6 1135 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 MEPEQ9NQ76 525 aaPredicted RBP5.05□□□□□ -1.6
EPHA4-202ENST00000409854 CNIH4Q9P003 139 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 MYOTQ9UBF9 498 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 TCFL5Q9UL49 500 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 ICAM5Q9UMF0 924 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM5Q9Y2B1 443 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 OTOGLQ3ZCN5 2332 aa5.05□□□□□ -1.6
EPHA4-202ENST00000409854 A0A087WUJ7 227 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 PROB1E7EW31 1015 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 CDC42EP2O14613 210 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SOX14O95416 240 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 IGFBP1P08833 259 aaPredicted RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 FBXO45P0C2W1 286 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 HPGDP15428 266 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 GAS1P54826 345 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 DLX5P56178 289 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SLC35A2P78381 396 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 RUNX1T1Q06455 604 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 CCDC157Q569K6 752 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 ALG10BQ5I7T1 473 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 FOXB2Q5VYV0 432 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 WBP2NLQ6ICG8 309 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 CBLN3Q6UW01 205 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 PPP1R32Q7Z5V6 425 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 ATG4DQ86TL0 474 aaPredicted RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 CROCCP3Q8IVE0 287 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 MISPQ8IVT2 679 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 OR11G2Q8NGC1 345 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 OR8D4Q8NGM9 314 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 PFN4Q8NHR9 129 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 PHOSPHO1Q8TCT1 267 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TRUB1Q8WWH5 349 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TTC9Q92623 222 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms