RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 MTNR1AP48039 350 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 BMXP51813 675 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 LIMK1P53667 647 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 VBP1P61758 197 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 BTG2P78543 158 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 HOXC5Q00444 222 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 MLLT11Q13015 90 aaPredicted RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 ELAVL1Q15717 326 aaKnown RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 PDZK1Q5T2W1 519 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 NKAIN2Q5VXU1 208 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 NXNL2Q5VZ03 156 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 ULK3Q6PHR2 472 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 TTLL10Q6ZVT0 673 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 BMP8AQ7Z5Y6 402 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 WDR5BQ86VZ2 330 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 GID4Q8IVV7 300 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 SLC34A3Q8N130 599 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF527Q8NB42 609 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 RCBTB1Q8NDN9 531 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 OR8D4Q8NGM9 314 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 NDNFQ8TB73 568 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 DNAJA4Q8WW22 397 aaPredicted RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 LRFN5Q96NI6 719 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 PTCHD1Q96NR3 888 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 GUCD1Q96NT3 240 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 DPYSL5Q9BPU6 564 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 TAPBPLQ9BX59 468 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 MRPL18Q9H0U6 180 aaKnown RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 DCSTAMPQ9H295 470 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 MMP27Q9H306 513 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF768Q9H5H4 540 aaKnown RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 SIDT1Q9NXL6 827 aaKnown RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 CCDC59Q9P031 241 aaKnown RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 LSM2Q9Y333 95 aaKnown RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 OR10H1Q9Y4A9 318 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 PCDHGA3Q9Y5H0 932 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 SCN2AQ99250 2005 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 EML5Q05BV3 1969 aa6.9□□□□□ -1.3
CXCR4-202ENST00000409817 SPTBN5Q9NRC6 3674 aaKnown RBP6.9□□□□□ -1.3
CXCR4-202ENST00000409817 A0A1B0GX78 115 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 C17orf105B2RV13 164 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 F8W735 103 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 HCN1O60741 890 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 NADKO95544 446 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 IGF2P01344 180 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 DCNP07585 359 aaKnown RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 ANKRD34CP0C6C1 535 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 GKN3PP0CG01 181 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 IFI30P13284 250 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 PRG2P13727 222 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF12P17014 697 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 MAOAP21397 527 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 NR4A1P22736 598 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 GADD45AP24522 165 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 PSMA1P25786 263 aaKnown RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 EPHA8P29322 1005 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 ACAA2P42765 397 aaKnown RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 GPR4P46093 362 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 GPR143P51810 404 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 NCS1P62166 190 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 AADACL4Q5VUY2 407 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 PMS2CLQ68D20 193 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 TMEM71Q6P5X7 295 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 NPSR1Q6W5P4 371 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 LNX2Q8N448 690 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 BCORP1Q8N888 145 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 OR52I1Q8NGK6 324 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 OR14A16Q8NHC5 309 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 CNOT9Q92600 299 aaKnown RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 DAZLQ92904 295 aaKnown RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 BPIFA2Q96DR5 249 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 SH3YL1Q96HL8 342 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 JAM3Q9BX67 310 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 SLC19A3Q9BZV2 496 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 OR52D1Q9H346 318 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 UBQLN3Q9H347 655 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 DSN1Q9H410 356 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 HHATLQ9HCP6 504 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF304Q9HCX3 659 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 MKKSQ9NPJ1 570 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 EXOSC3Q9NQT5 275 aaKnown RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 UBQLN4Q9NRR5 601 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 FAM86C1Q9NVL1 165 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 H2AFY2Q9P0M6 372 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 RPS6KB2Q9UBS0 482 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 NTNG1Q9Y2I2 539 aa6.9□□□□□ -1.31
CXCR4-202ENST00000409817 TMEM184BQ9Y519 407 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-202ENST00000409817 NPIPA5A0A0B4J1W7 369 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 A0A1B0GWA3 101 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 TCRBV16S1A1N1A0A5B0 115 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 FRG2CA6NGY1 282 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 SERINC4A6NH21 518 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 OR6C76A6NM76 312 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 NPIPA7E9PJI5 369 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 CDC42EP2O14613 210 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 GNB5O14775 395 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 CSO75390 466 aaKnown RBP6.89□□□□□ -1.31
CXCR4-202ENST00000409817 PPM1BO75688 479 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 IL33O95760 270 aa6.89□□□□□ -1.31
CXCR4-202ENST00000409817 IGKV1D-16P01601 117 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms