RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 DNAJB12Q9NXW2 375 aaKnown RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 ARMCX1Q9P291 453 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 CLCF1Q9UBD9 225 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 Q9UFV3 132 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 MCTS1Q9ULC4 181 aaKnown RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF175Q9Y473 711 aa9.83□□□□□ -0.84
CHMP3-205ENST00000409810 FLNBO75369 2602 aaKnown RBP9.83□□□□□ -0.84
CHMP3-205ENST00000409810 CDHR4A6H8M9 788 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CFAP73A6NFT4 308 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SLC22A20A6NK97 555 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CLDN24A6NM45 220 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 ETV2O00321 342 aaPredicted RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 FAAHO00519 579 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SERPINB7O75635 380 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 RCBTB2O95199 551 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 IL18BPO95998 194 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 TMIGD3P0DMS9 266 aaPredicted RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CTSSP25774 331 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SLC7A1P30825 629 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 PRKAR1BP31321 381 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 RYKP34925 604 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 OPRM1P35372 400 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 EIF1AXP47813 144 aaKnown RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SUCLG1P53597 346 aaKnown RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CLDN15P56746 228 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CLDN20P56880 219 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SESN3P58005 492 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 COPZ1P61923 177 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CAPRIN1Q14444 709 aaKnown RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 TOMM34Q15785 309 aaPredicted RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 INTS11Q5TA45 600 aaKnown RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SEM1Q6ZVN7 128 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 GRINAQ7Z429 371 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 ARPINQ7Z6K5 226 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 MTDHQ86UE4 582 aaKnown RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 GGNQ86UU5 652 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 VRK2Q86Y07 508 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CCDC71Q8IV32 467 aaPredicted RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 LILRA2Q8N149 483 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 C9orf106Q8NAJ2 232 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 TNIP2Q8NFZ5 429 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 OR10A6Q8NH74 314 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 OR2V1Q8NHB1 315 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SLC25A43Q8WUT9 341 aaPredicted RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SLC35B4Q969S0 331 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CMTM5Q96DZ9 223 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 ECSITQ9BQ95 431 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 CCDC106Q9BWC9 280 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 PRRG4Q9BZD6 226 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 TMEM185BQ9H7F4 350 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 ACER3Q9NUN7 267 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF629Q9UEG4 869 aaPredicted RBP9.82□□□□□ -0.84
CHMP3-205ENST00000409810 SLC13A4Q9UKG4 626 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 AP3M1Q9Y2T2 418 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 PKDREJQ9NTG1 2253 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 HECTD1Q9ULT8 2610 aa9.82□□□□□ -0.84
CHMP3-205ENST00000409810 PRORSD1PA6NEY8 169 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 TNFSF11O14788 317 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 ADAMDEC1O15204 470 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 BCAS1O75363 584 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-205ENST00000409810 SYNGR4O95473 234 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 NTN1O95631 604 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 COX4I1P13073 169 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 FKBP2P26885 142 aaKnown RBP9.81□□□□□ -0.84
CHMP3-205ENST00000409810 SFTPDP35247 375 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 APOBEC1P41238 236 aaKnown RBP9.81□□□□□ -0.84
CHMP3-205ENST00000409810 DLX5P56178 289 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 MERTKQ12866 999 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 EPS8Q12929 822 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 SELPLGQ14242 412 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 PON3Q15166 354 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 HBMQ6B0K9 141 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 NANOGP8Q6NSW7 305 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 PPP4R4Q6NUP7 873 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 ERICH5Q6P6B1 374 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 PLEKHM3Q6ZWE6 761 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 NET1Q7Z628 596 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-205ENST00000409810 OR10D3Q8NH80 312 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 CNOT9Q92600 299 aaKnown RBP9.81□□□□□ -0.84
CHMP3-205ENST00000409810 RCN3Q96D15 328 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 REXO5Q96IC2 774 aaKnown RBP9.81□□□□□ -0.84
CHMP3-205ENST00000409810 NPAS1Q99742 590 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 KLHDC3Q9BQ90 382 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 SFXN3Q9BWM7 321 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 KAT8Q9H7Z6 458 aaKnown RBP9.81□□□□□ -0.84
CHMP3-205ENST00000409810 EVA1AQ9H8M9 152 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 NANOGQ9H9S0 305 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 CHRNA9Q9UGM1 479 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 ARL2BPQ9Y2Y0 163 aa9.81□□□□□ -0.84
CHMP3-205ENST00000409810 KDM4EB2RXH2 506 aaPredicted RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 H0YC42 278 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 DCTN3O75935 186 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 TOXO94900 526 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 CRHP06850 196 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 BMP5P22003 454 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 PRDX6P30041 224 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 PCGF2P35227 344 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 IDH2P48735 452 aaKnown RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 POLR2HP52434 150 aaKnown RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 MAP2K6P52564 334 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms