RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SLC6A8P48029 635 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 SEC24CP53992 1094 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 SELENBP1Q13228 472 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 ACBD4Q8NC06 268 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 OR2V1Q8NHB1 315 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 NFKBIDQ8NI38 313 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 BBS10Q8TAM1 723 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 FNDC9Q8TBE3 224 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 INTS12Q96CB8 462 aaKnown RBP27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 ACER3Q9NUN7 267 aa27.99■■■□□ 2.07
TRAF3IP1-203ENST00000409739 CDHR4A6H8M9 788 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 C5orf58C9J3I9 102 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 AP3D1O14617 1153 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 IL18BPO95998 194 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 THBS1P07996 1170 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 ADSLP30566 484 aaPredicted RBP27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 OPRM1P35372 400 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 AGFG1P52594 562 aaKnown RBP27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 GYS2P54840 703 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 DLX5P56178 289 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 MTPNP58546 118 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 EEF1A1P68104 462 aaKnown RBP27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 SELPLGQ14242 412 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 SGCBQ16585 318 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 SFXN3Q9BWM7 321 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 TMEM38AQ9H6F2 299 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 RLIMQ9NVW2 624 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 CAPN7Q9Y6W3 813 aa27.98■■■□□ 2.07
TRAF3IP1-203ENST00000409739 PGM3O95394 542 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 LSP1P33241 339 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 CDK6Q00534 326 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 MAPRE2Q15555 327 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 TRMT5Q32P41 509 aaKnown RBP27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 COQ5Q5HYK3 327 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 RNF220Q5VTB9 566 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 HBMQ6B0K9 141 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 PLEKHM3Q6ZWE6 761 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 SNX32Q86XE0 403 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 ZNF563Q8TA94 476 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 ENKD1Q9H0I2 346 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 PAQR5Q9NXK6 330 aaPredicted RBP27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 ARMCX1Q9P291 453 aa27.97■■■□□ 2.07
TRAF3IP1-203ENST00000409739 GJE1A6NN92 205 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 HNRNPRO43390 633 aaKnown RBP27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 CXCL13O43927 109 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 COX6B1P14854 86 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 IGFBP2P18065 325 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 MERTKQ12866 999 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 CAPRIN1Q14444 709 aaKnown RBP27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 LARS2Q15031 903 aaKnown RBP27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 ADRM1Q16186 407 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 REP15Q6BDI9 236 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 OR2A2Q6IF42 318 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 C3orf33Q6P1S2 294 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 SPATA21Q7Z572 469 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 ATP6V1C2Q8NEY4 427 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 MARVELD3Q96A59 401 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 RNF122Q9H9V4 155 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 CACYBPQ9HB71 228 aaKnown RBP27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 CHST2Q9Y4C5 530 aa27.96■■■□□ 2.07
TRAF3IP1-203ENST00000409739 BBIP1A8MTZ0 92 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 SLC22A2O15244 555 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 AQP8O94778 261 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 PABPC4LP0CB38 370 aaKnown RBP27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 ETS2P15036 469 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 ASCL1P50553 236 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 EPS8Q12929 822 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 SCARB2Q14108 478 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 TMEM176BQ3YBM2 270 aaPredicted RBP27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 PDSS1Q5T2R2 415 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 REEP3Q6NUK4 255 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 ELAC2Q9BQ52 826 aaKnown RBP27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 SLC39A3Q9BRY0 314 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 CCDC106Q9BWC9 280 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 COQ10BQ9H8M1 238 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 IFT52Q9Y366 437 aa27.95■■■□□ 2.06
TRAF3IP1-203ENST00000409739 DCHS2Q6V1P9 2916 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 A0A1W2PNV4 684 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 FXYD1O00168 92 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 MRASO14807 208 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 TNFSF13O75888 250 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 FCGR2AP12318 317 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 IDH2P48735 452 aaKnown RBP27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 MMEL1Q495T6 779 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 PPP4R4Q6NUP7 873 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 GRINAQ7Z429 371 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 ZNF440Q8IYI8 595 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 CLIP4Q8N3C7 705 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 SPOCK3Q9BQ16 436 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 SPATA9Q9BWV2 254 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 FAM107BQ9H098 131 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 MCTS1Q9ULC4 181 aaKnown RBP27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 ZNF232Q9UNY5 417 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 ITPR2Q14571 2701 aa27.94■■■□□ 2.06
TRAF3IP1-203ENST00000409739 CFAP73A6NFT4 308 aa27.93■■■□□ 2.06
TRAF3IP1-203ENST00000409739 EEF1E1-BLOC1S5C9J1V9 151 aa27.93■■■□□ 2.06
TRAF3IP1-203ENST00000409739 FAAHO00519 579 aa27.93■■■□□ 2.06
TRAF3IP1-203ENST00000409739 EEF1E1O43324 174 aaKnown RBP27.93■■■□□ 2.06
TRAF3IP1-203ENST00000409739 CRHP06850 196 aa27.93■■■□□ 2.06
TRAF3IP1-203ENST00000409739 GKN3PP0CG01 181 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms