RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 MAGED1Q9Y5V3 778 aaPredicted RBP4.4□□□□□ -1.7
R3HDM1-203ENST00000409606 A0A087WUU8 490 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 CCDC182A6NF36 153 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 SS18L1O75177 396 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 SNX4O95219 450 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 IGHA1P01876 353 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ADRA2AP08913 450 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 FOLR3P41439 243 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 SLC1A3P43003 542 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 CD97P48960 835 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 GABREP78334 506 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 DAB2P98082 770 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 CDC20Q12834 499 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ERV3-1Q14264 604 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 RPS6KA2Q15349 733 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 MMEL1Q495T6 779 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 NRN1LQ496H8 165 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 KCTD21Q4G0X4 260 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 BORAQ6PGQ7 559 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 Q6ZS92 163 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF550Q7Z398 422 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ZER1Q7Z7L7 766 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ADGRG3Q86Y34 549 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 RBM45Q8IUH3 476 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 LNX2Q8N448 690 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 MRGPRX4Q96LA9 322 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 PTCHD1Q96NR3 888 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 C9orf16Q9BUW7 83 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 OSBPL11Q9BXB4 747 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 MRPL13Q9BYD1 178 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 LHPPQ9H008 270 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 FN3KQ9H479 309 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 Q9N2J8 555 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 DEPPQ9NTK1 212 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF226Q9NYT6 803 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 TRPC4Q9UBN4 977 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 PCDHGB4Q9UN71 923 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 KCNMB2Q9Y691 235 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 UBR5O95071 2799 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 TRBV4-1A0A0J9YWV2 114 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ANKRD61A6NGH8 418 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 PDLIM1O00151 329 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 AP3D1O14617 1153 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 IGLV3-1P01715 115 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 HEXBP07686 556 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 PRG2P13727 222 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 UQCRBP14927 111 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 CPN1P15169 458 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 CNR1P21554 472 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 GGT2P36268 569 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ALDH3B2P48448 385 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 PPIAP62937 165 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 WBP2NLQ6ICG8 309 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF620Q6ZNG0 422 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 RTL4Q6ZR62 310 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 PLEKHM3Q6ZWE6 761 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ADCK2Q7Z695 626 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 FGD2Q7Z6J4 655 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 DNAJA4Q8WW22 397 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 TRUB1Q8WWH5 349 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 PYDC1Q8WXC3 89 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF184Q99676 751 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 TRIM2Q9C040 744 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 KLHL4Q9C0H6 718 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 NRIP3Q9NQ35 241 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 DDX18Q9NVP1 670 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 FAM118AQ9NWS6 357 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 DCAF16Q9NXF7 216 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 MRPL39Q9NYK5 338 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 EGFL7Q9UHF1 273 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 SIGLEC7Q9Y286 467 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 AP4B1Q9Y6B7 739 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 MAU2Q9Y6X3 613 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 DMXL2Q8TDJ6 3036 aa4.4□□□□□ -1.71
R3HDM1-203ENST00000409606 TRAPPC13A5PLN9 417 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 ZZEF1O43149 2961 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 IDH3BO43837 385 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 ZNF432O94892 652 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 TNFSF15O95150 251 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 MT-ATP6P00846 226 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 PNMTP11086 282 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 FASP25445 335 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 CRATP43155 626 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 UGT2B15P54855 530 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 SLC13A2Q13183 592 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 NSDHLQ15738 373 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 EMC4Q5J8M3 183 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 AADACL4Q5VUY2 407 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 RPL13AP3Q6NVV1 102 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 FAM180BQ6P0A1 224 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 ULK3Q6PHR2 472 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 WDFY1Q8IWB7 410 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 OR8D4Q8NGM9 314 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 RHOXF1Q8NHV9 184 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 POLDIP3Q9BY77 421 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 JKAMPQ9P055 326 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 FOXD3Q9UJU5 478 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 POFUT2Q9Y2G5 429 aa4.39□□□□□ -1.71
R3HDM1-203ENST00000409606 OR2W5A6NFC9 320 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms