RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 C22orf15Q8WYQ4 148 aa23.4■■□□□ 1.34
SPIRE1-202ENST00000409402 MRPS14O60783 128 aaKnown RBP23.4■■□□□ 1.34
SPIRE1-202ENST00000409402 UBE2UQ5VVX9 321 aa23.4■■□□□ 1.34
SPIRE1-202ENST00000409402 BEST3Q8N1M1 668 aa23.4■■□□□ 1.34
SPIRE1-202ENST00000409402 NUDT22Q9BRQ3 303 aa23.4■■□□□ 1.34
SPIRE1-202ENST00000409402 MRI1Q9BV20 369 aa23.4■■□□□ 1.34
SPIRE1-202ENST00000409402 THSD1Q9NS62 852 aa23.4■■□□□ 1.34
SPIRE1-202ENST00000409402 FBXO45P0C2W1 286 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 COL28A1Q2UY09 1125 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 C9orf135Q5VTT2 229 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 BORAQ6PGQ7 559 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 SYNPOQ8N3V7 929 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 FOLH1BQ9HBA9 442 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 TSPAN4O14817 238 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 ZNF81P51508 661 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 CPT1CQ8TCG5 803 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 KIR3DX1Q9H7L2 352 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 PRDM9Q9NQV7 894 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 MAN2C1Q9NTJ4 1040 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 CXXC1Q9P0U4 656 aaPredicted RBP23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 MYH8P13535 1937 aa23.39■■□□□ 1.34
SPIRE1-202ENST00000409402 KLRC4-KLRK1H3BQV0 150 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 SLC35A1P78382 337 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 WFDC5Q8TCV5 224 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 SLC46A1Q96NT5 459 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 TREX2Q9BQ50 279 aaPredicted RBP23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 C6orf106Q9H6K1 298 aaPredicted RBP23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 TMEM265A0A087WTH1 108 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 HCRTR1O43613 425 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 VASNQ6EMK4 673 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 C16orf58Q96GQ5 468 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 ZC3H10Q96K80 434 aaKnown RBP23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 MS4A8Q9BY19 250 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 DDAH2O95865 285 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 RGS6P49758 472 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 FXYD4P59646 89 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 VN1R3Q9BXE9 311 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 TP63Q9H3D4 680 aaPredicted RBP23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 MAB21L2Q9Y586 359 aa23.39■■□□□ 1.33
SPIRE1-202ENST00000409402 CD34P28906 385 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 PLAG1Q6DJT9 500 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 AAED1Q7RTV5 226 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 PDXPQ96GD0 296 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 NOSIPQ9Y314 301 aaKnown RBP23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 IFNA1P01562 189 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 ARAFP10398 606 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 C17orf67Q0P5P2 114 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 CDK5R2Q13319 367 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 PGGHGQ32M88 737 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 UBALD2Q8IYN6 164 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 ASB17Q8WXJ9 295 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 UBXN10Q96LJ8 280 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 DDX31Q9H8H2 851 aaKnown RBP23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 SYNPO2LQ9H987 977 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 WASH6PQ9NQA3 447 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 ZNF223Q9UK11 482 aaPredicted RBP23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 HHLA2Q9UM44 414 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 MRPS2Q9Y399 296 aaKnown RBP23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 B3GALT1Q9Y5Z6 326 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 SLC22A7Q9Y694 548 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 A0A1B0GX78 115 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 SERINC4A6NH21 518 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 SRFP11831 508 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 PTH2RP49190 550 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 ATP1B3P54709 279 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 CXCR4P61073 352 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 MKXQ8IYA7 352 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 PIGQQ9BRB3 760 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 TRPM3Q9HCF6 1732 aaPredicted RBP23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 OR7A17O14581 309 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 PKLRP30613 574 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 TBRG1Q3YBR2 411 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 ZNF322Q6U7Q0 402 aaPredicted RBP23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 CENPSQ8N2Z9 138 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 MICU1Q9BPX6 476 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 OR2S2Q9NQN1 319 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 TBX21Q9UL17 535 aa23.38■■□□□ 1.33
SPIRE1-202ENST00000409402 EEF1E1-BLOC1S5C9J1V9 151 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 SMAD2Q15796 467 aaKnown RBP23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 MEPCEQ7L2J0 689 aaKnown RBP23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 FAM217AQ8IXS0 508 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 C7orf34Q96L11 122 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 RANBP3Q9H6Z4 567 aaPredicted RBP23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 ZNF749O43361 778 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 DBHP09172 617 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 PSMB10P40306 273 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 SQSTM1Q13501 440 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 EXT1Q16394 746 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 FAM160A2Q8N612 972 aaPredicted RBP23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 GTF2H4Q92759 462 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 INPP5EQ9NRR6 644 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 MYH7P12883 1935 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 KDM4EB2RXH2 506 aaPredicted RBP23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 FANCGO15287 622 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 EDIL3O43854 480 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 SLCO2B1O94956 709 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 SLC22A10Q63ZE4 541 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 MOB3CQ70IA8 216 aa23.37■■□□□ 1.33
SPIRE1-202ENST00000409402 OR7G1Q8NGA0 311 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms