RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 AQP12AQ8IXF9 295 aa12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 POC1BQ8TC44 478 aa12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 OIT3Q8WWZ8 545 aa12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 PYDC1Q8WXC3 89 aa12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 SMPDL3BQ92485 455 aa12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 SLCO4A1Q96BD0 722 aa12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 SNRNP40Q96DI7 357 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 DCLRE1BQ9H816 532 aa12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 B4GALT7Q9UBV7 327 aa12.78□□□□□ -0.36
CHRNA1-204ENST00000409323 TTLL8A6PVC2 850 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 THY1P04216 161 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 SFTPCP11686 197 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 PEPDP12955 493 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 PRKCAP17252 672 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 ENDOUP21128 410 aaKnown RBP12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 MSX1P28360 303 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 CHRNB3Q05901 458 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 MERTKQ12866 999 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 PPP1R8Q12972 351 aaKnown RBP12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 FAM98BQ52LJ0 330 aaKnown RBP12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 CMPK2Q5EBM0 449 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 MTX3Q5HYI7 312 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 AAGABQ6PD74 315 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 FAM180AQ6UWF9 173 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 P3H2Q8IVL5 708 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 ZNF440Q8IYI8 595 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 FAM109AQ8N4B1 249 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 ADAMTS16Q8TE57 1224 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 C7orf34Q96L11 122 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 LDAHQ9H6V9 325 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 EXO5Q9H790 373 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 RNPEPL1Q9HAU8 725 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 ASF1BQ9NVP2 202 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 NDUFAF4Q9P032 175 aa12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 TESQ9UGI8 421 aaKnown RBP12.77□□□□□ -0.36
CHRNA1-204ENST00000409323 COL6A6A6NMZ7 2263 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 A0A1B0GWA3 101 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 FAM47E-STBD1D6RA91 191 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 H3BML4 177 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 FFAR1O14842 300 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 FABP3P05413 133 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 GP1BBP13224 206 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 PSMA4P25789 261 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 TACR3P29371 465 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 SRD5A2P31213 254 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 GCKP35557 465 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 SLC6A8P48029 635 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 STARP49675 285 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 SUMO3P55854 103 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 TAS2R41P59536 307 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 COPZ1P61923 177 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 KCNC4Q03721 635 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 SLC10A1Q14973 349 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 ZNF559Q9BR84 538 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 CHID1Q9BWS9 393 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 UGT2B28Q9BY64 529 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 RPS6KB2Q9UBS0 482 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 SLC7A7Q9UM01 511 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 TESMINQ9Y4I5 508 aa12.77□□□□□ -0.37
CHRNA1-204ENST00000409323 SPTA1P02549 2419 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 OR2M5A3KFT3 312 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 ATXN7O15265 892 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 EFNA2O43921 213 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 TIPRLO75663 272 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 CDH12P55289 794 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 SNCBQ16143 134 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 C3AR1Q16581 482 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 HYAL4Q2M3T9 481 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 IQCCQ4KMZ1 466 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 DCST1Q5T197 706 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 WBP2NLQ6ICG8 309 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 RPUSD3Q6P087 351 aaKnown RBP12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 WDR88Q6ZMY6 472 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 TRILQ7L0X0 811 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 SIAH3Q8IW03 269 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 OR52J3Q8NH60 311 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 PHF10Q8WUB8 498 aaKnown RBP12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 C3orf49Q96BT1 292 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 SFXN2Q96NB2 322 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 ZNF300Q96RE9 604 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 TMEM27Q9HBJ8 222 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 IL1RAPQ9NPH3 570 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 OSGIN1Q9UJX0 560 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 ENPP4Q9Y6X5 453 aa12.76□□□□□ -0.37
CHRNA1-204ENST00000409323 H0YC42 278 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 FKBP6O75344 327 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 HPNP05981 417 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 RAP2AP10114 183 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 UQCRBP14927 111 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 SHC1P29353 583 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 SFTPDP35247 375 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 B3GALT5-AS1P59052 145 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 LSM11P83369 360 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 SPIBQ01892 262 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 C19orf57Q0VDD7 668 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 ZSWIM7Q19AV6 140 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 ALG10BQ5I7T1 473 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms