RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SERTM1A2A2V5 107 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 TRIM49D1C9J1S8 452 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 H3BNH8 94 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 ATP6V1C1P21283 382 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 IL2RGP31785 369 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 CCR4P51679 360 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 FOXA1P55317 472 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 PKNOX1P55347 436 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 SNRPD2P62316 118 aaKnown RBP14.59□□□□□ -0.07
CHMP3-203ENST00000409225 LCP2Q13094 533 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 ZNF385BQ569K4 471 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.59□□□□□ -0.07
CHMP3-203ENST00000409225 C9orf135Q5VTT2 229 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 ABLIM2Q6H8Q1 611 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 OR7E24Q6IFN5 339 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 NOXRED1Q6NXP6 359 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 C3orf33Q6P1S2 294 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 RINLQ6ZS11 566 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 ZNF614Q8N883 585 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 WDR31Q8NA23 367 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 ZNF527Q8NB42 609 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 ZNF540Q8NDQ6 660 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 SPATA4Q8NEY3 305 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 ZFP28Q8NHY6 868 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 FAM76AQ8TAV0 307 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 CDS1Q92903 461 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 MUS81Q96NY9 551 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 BTBD2Q9BX70 525 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 QRSL1Q9H0R6 528 aaKnown RBP14.59□□□□□ -0.07
CHMP3-203ENST00000409225 NINJ2Q9NZG7 142 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 METRNQ9UJH8 293 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 MOKQ9UQ07 419 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 STK38LQ9Y2H1 464 aa14.59□□□□□ -0.07
CHMP3-203ENST00000409225 HSPA4LO95757 839 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 ITGA5P08648 1049 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 IMPDH1P20839 514 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 DIO1P49895 249 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 SLC25A3Q00325 362 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 QPRTQ15274 297 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 KLHL26Q53HC5 615 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 SLC25A53Q5H9E4 307 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 SEMA6DQ8NFY4 1073 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 OR52E4Q8NGH9 312 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 ARL8AQ96BM9 186 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 PAFAH2Q99487 392 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 IQCGQ9H095 443 aaKnown RBP14.58□□□□□ -0.08
CHMP3-203ENST00000409225 RAB17Q9H0T7 212 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 MID1IP1Q9NPA3 183 aa14.58□□□□□ -0.08
CHMP3-203ENST00000409225 IGKV3D-15A0A087WSY6 115 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 SULT2B1O00204 365 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 AKAP10O43572 662 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 SLU7O95391 586 aaKnown RBP14.57□□□□□ -0.08
CHMP3-203ENST00000409225 EFNA1P20827 205 aaPredicted RBP14.57□□□□□ -0.08
CHMP3-203ENST00000409225 APEX1P27695 318 aaKnown RBP14.57□□□□□ -0.08
CHMP3-203ENST00000409225 NTF4P34130 210 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 SERPINB9P50453 376 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 TIGD2Q4W5G0 525 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 EXOSC6Q5RKV6 272 aaKnown RBP14.57□□□□□ -0.08
CHMP3-203ENST00000409225 CDC73Q6P1J9 531 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 ZCCHC12Q6PEW1 402 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 TMPPEQ6ZT21 453 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 LINC01356Q8N9X3 169 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 TOR1AIP2Q8NFQ8 470 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 OR5W2Q8NH69 310 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 ZFAND2BQ8WV99 257 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 HOXD1Q9GZZ0 328 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 METTL17Q9H7H0 456 aaPredicted RBP14.57□□□□□ -0.08
CHMP3-203ENST00000409225 SLC17A5Q9NRA2 495 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 MALT1Q9UDY8 824 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 AMDHD2Q9Y303 409 aa14.57□□□□□ -0.08
CHMP3-203ENST00000409225 ZNF716A6NP11 495 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 MRPL33O75394 65 aaKnown RBP14.56□□□□□ -0.08
CHMP3-203ENST00000409225 RGS9O75916 674 aaPredicted RBP14.56□□□□□ -0.08
CHMP3-203ENST00000409225 RSL1D1O76021 490 aaKnown RBP14.56□□□□□ -0.08
CHMP3-203ENST00000409225 STAMBPO95630 424 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 ATP5F1P24539 256 aaPredicted RBP14.56□□□□□ -0.08
CHMP3-203ENST00000409225 CHN2P52757 468 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 CSNK2A1P68400 391 aaPredicted RBP14.56□□□□□ -0.08
CHMP3-203ENST00000409225 CBFBQ13951 182 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 LASP1Q14847 261 aaKnown RBP14.56□□□□□ -0.08
CHMP3-203ENST00000409225 PDK3Q15120 406 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 ZSWIM7Q19AV6 140 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 SPATA19Q7Z5L4 167 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 MTDHQ86UE4 582 aaKnown RBP14.56□□□□□ -0.08
CHMP3-203ENST00000409225 PPCDCQ96CD2 204 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 DNAJA3Q96EY1 480 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 SNX18Q96RF0 628 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 TMEM216Q9P0N5 145 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 SH3BP4Q9P0V3 963 aa14.56□□□□□ -0.08
CHMP3-203ENST00000409225 A0A0A6YYJ9 748 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 POC1B-GALNT4F8VUJ3 575 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 SLCO1B7G3V0H7 640 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 ETV2O00321 342 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-203ENST00000409225 SEC22BO75396 215 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 HMGN2P05204 90 aaKnown RBP14.55□□□□□ -0.08
CHMP3-203ENST00000409225 TFPIP10646 304 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 SERPINF1P36955 418 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 COMPP49747 757 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-203ENST00000409225 PRKAA2P54646 552 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 GCDHQ92947 438 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms