RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 TMEM138Q9NPI0 162 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 ASH2LQ9UBL3 628 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 NPFFR2Q9Y5X5 522 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 KANTRA0A1W2PQU2 76 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 GABARAPH6UMI1 98 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 RLN1P04808 185 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 ABOP16442 354 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 XPAP23025 273 aaPredicted RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 HTR2AP28223 471 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 ALKBH1Q13686 389 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 RBM39Q14498 530 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 KRT33BQ14525 404 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 C21orf62-AS1Q17RA5 79 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 ACSM3Q53FZ2 586 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 UBE2NLQ5JXB2 153 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 SERPINA13PQ6UXR4 307 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 DNAAF1Q8NEP3 725 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 CXorf40BQ96DE9 158 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 FAM46AQ96IP4 442 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 DERL3Q96Q80 235 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 UCK1Q9HA47 277 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 IL26Q9NPH9 171 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 MRPL17Q9NRX2 175 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 ANKRD20A5PA0PJZ0 165 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 ANTXRLA6NF34 631 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 RFPL4AA6NLU0 287 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 RFPL4AL1F8VTS6 287 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 ZDHHC11BP0C7U3 371 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 GSTM3P21266 225 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 TACR2P21452 398 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 MAT2AP31153 395 aaKnown RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 HCCSP53701 268 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 IER5LQ5T953 404 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 JMJD6Q6NYC1 403 aaPredicted RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 LINGO4Q6UY18 593 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 BEND4Q6ZU67 534 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 SSX9Q7RTT3 188 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 ACBD7Q8N6N7 88 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 DNAJB3Q8WWF6 145 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 ING5Q8WYH8 240 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 TREM1Q9NP99 234 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 METTL1Q9UBP6 276 aaKnown RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 AK6Q9Y3D8 172 aaKnown RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 SYT5O00445 386 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 FARS2O95363 451 aaKnown RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 TYRP1P17643 537 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 SEMG2Q02383 582 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 NAE1Q13564 534 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 PLBD1Q6P4A8 553 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 SLC36A1Q7Z2H8 476 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 OR10H4Q8NGA5 316 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 CPNE2Q96FN4 548 aaPredicted RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 ZC3H10Q96K80 434 aaKnown RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 HINT3Q9NQE9 182 aaKnown RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 DZANK1Q9NVP4 752 aa11.88□□□□□ -0.51
HERC3-203ENST00000407637 ZNF230Q9UIE0 474 aaPredicted RBP11.88□□□□□ -0.51
HERC3-203ENST00000407637 OR14I1A6ND48 311 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 ARGFXA6NJG6 315 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 J3QRE1 110 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 FLRT2O43155 660 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 STX11O75558 287 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 OR8U8P0C7N1 319 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 ACTR1BP42025 376 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 MECP2P51608 486 aaKnown RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 COMMD6Q7Z4G1 85 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 CPOQ8IVL8 374 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 OR6T1Q8NGN1 323 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 FCAMRQ8WWV6 532 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 C14orf79Q96F83 325 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 MED8Q96G25 268 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 GJD4Q96KN9 370 aaPredicted RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 GAL3ST1Q99999 423 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.87□□□□□ -0.51
HERC3-203ENST00000407637 MED20Q9H944 212 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 A4GALTQ9NPC4 353 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 TAS2R10Q9NYW0 307 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 TREM2Q9NZC2 230 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 ASF1AQ9Y294 204 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 A0A087WUU8 490 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 LATS1O95835 1130 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 ASGR2P07307 311 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 NQO2P16083 231 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 NDUFB7P17568 137 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 EIF2S3P41091 472 aaKnown RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 ADCYAP1R1P41586 468 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 TAS2R50P59544 299 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 SREBF2Q12772 1141 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 GRHL2Q6ISB3 625 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 NUDT18Q6ZVK8 323 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 THOC6Q86W42 341 aaKnown RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 BBS10Q8TAM1 723 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 PXYLP1Q8TE99 480 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 ASB11Q8WXH4 323 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 ACOT11Q8WXI4 607 aaPredicted RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 PGLYRP3Q96LB9 341 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms