RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CABLES2Q9BTV7 478 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 TSPYL1Q9H0U9 437 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 SLC25A51Q9H1U9 297 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 GBA3Q9H227 469 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 LINC00597Q9H2U6 94 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 ECT2Q9H8V3 914 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 AKIRIN1Q9H9L7 192 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 HPS4Q9NQG7 708 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 DEC1Q9P2X7 70 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 HS3ST2Q9Y278 367 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 MRPS18CQ9Y3D5 142 aaKnown RBP4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 FER1L5A0AVI2 2057 aa4.1□□□□□ -1.75
HMGB3P19-201ENST00000403971 PLXNA2O75051 1894 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 PLXND1Q9Y4D7 1925 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 SPAG17Q6Q759 2223 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 IGHV3-38A0A0C4DH36 116 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 LOC730098B7Z3J9 87 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 NEDD8-MDP1E9PL57 170 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 KCNK1O00180 336 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 AP3B1O00203 1094 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 RNF103O00237 685 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 SYT7O43581 403 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 DCXO43602 365 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ERLIN1O75477 346 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ANXA9O76027 345 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CD160O95971 181 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CGAP01215 116 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 EPOP01588 193 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 JCHAINP01591 159 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CHRNGP07510 517 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 RHOXF2BP0C7M4 288 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 RNF224P0DH78 156 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 MLNP12872 115 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 B4GALT1P15291 398 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 POLR2EP19388 210 aaKnown RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 TPSB2P20231 275 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 GDI1P31150 447 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CD70P32970 193 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CSKP41240 450 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CASP3P42574 277 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 KIAA1024LP59773 190 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 SARNPP82979 210 aaKnown RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ARF5P84085 180 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ACTN3Q08043 901 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 SLC10A7Q0GE19 358 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 LY6DQ14210 128 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 PRPSAP1Q14558 356 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 KCNJ11Q14654 390 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 LASP1Q14847 261 aaKnown RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 TPSAB1Q15661 275 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 TAF1BQ53T94 588 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 EMBQ6PCB8 327 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 C3P1Q6ZMU1 363 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 PID1Q7Z2X4 250 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 PRSS42Q7Z5A4 293 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 RALGPS2Q86X27 583 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 SERPINA12Q8IW75 414 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 TRPV3Q8NET8 790 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CCDC110Q8TBZ0 833 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ART4Q93070 314 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 TADA1Q96BN2 335 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ULK4Q96C45 1275 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 PDLIM5Q96HC4 596 aaKnown RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 RHOXF2Q9BQY4 288 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 TRIM51Q9BSJ1 452 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CCM2Q9BSQ5 444 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 NTMT1Q9BV86 223 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 PARD6BQ9BYG5 372 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 PLA2G2FQ9BZM2 168 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 POLR1EQ9GZS1 481 aaKnown RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 C8orf33Q9H7E9 229 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 DNAJC11Q9NVH1 559 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 RBM22Q9NW64 420 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ELOVL2Q9NXB9 296 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF319Q9P2F9 582 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 MTRF1LQ9UGC7 380 aaKnown RBP4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 GGA2Q9UJY4 613 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 CLEC4EQ9ULY5 219 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR1A2Q9Y585 309 aa4.09□□□□□ -1.75
HMGB3P19-201ENST00000403971 ANKRD12Q6UB98 2062 aa4.09□□□□□ -1.76
HMGB3P19-201ENST00000403971 UQCRHLA0A096LP55 91 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 A0A0J9YWU9 116 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 A0A1W2PQ67 120 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 TMEM129A0AVI4 362 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 EPM2AB3EWF7 344 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 E7ESA3 106 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 CACNB4O00305 520 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 DYNC1I1O14576 645 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 TFECO14948 347 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 EIF3HO15372 352 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF749O43361 778 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZFC3H1O60293 1989 aaKnown RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 SNAP91O60641 907 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 NEBLO76041 1014 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 AP2A1O95782 977 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 APODP05090 189 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 HLA-DQB2P05538 268 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 APRTP07741 180 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 UQCRHP07919 91 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 SERPINF2P08697 491 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms