RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 POLDIP3Q9BY77 421 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRRG4Q9BZD6 226 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF350Q9GZX5 532 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 HOXD1Q9GZZ0 328 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 QRSL1Q9H0R6 528 aaKnown RBP5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 LIME1Q9H400 295 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 RNF122Q9H9V4 155 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 BTNL2Q9UIR0 455 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF175Q9Y473 711 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 WDR45Q9Y484 360 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 AP4B1Q9Y6B7 739 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 USH1CQ9Y6N9 552 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 MED13LQ71F56 2210 aa5.17□□□□□ -1.58
HMGB1P20-201ENST00000402555 IGHV3-15A0A0B4J1V0 119 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 C7orf72A4D263 438 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 DUXAA6NLW8 204 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 A6NNC1 897 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 A8MXE2 369 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLCO1B7G3V0H7 640 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 H3BNH8 94 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 KLF11O14901 512 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 UBDO15205 165 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF264O43296 627 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 KIAA0513O60268 411 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 STX11O75558 287 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CTAG2O75638 210 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 SLC22A3O75751 556 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 SYNGR4O95473 234 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 H6PDO95479 791 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 NTN1O95631 604 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 AK1P00568 194 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CSTAP01040 98 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CGAP01215 116 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CHRM4P08173 479 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 UBTFL6P0CB48 400 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 IDO1P14902 403 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CD1EP15812 388 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 H2AFXP16104 143 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 PRKCAP17252 672 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 KLK2P20151 261 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CAPN3P20807 821 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ME2P23368 584 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CCKARP32238 428 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 RYKP34925 604 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 PLAURQ03405 335 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 QPRTQ15274 297 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 GUSBP1Q15486 140 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF141Q15928 474 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 EXOC3L2Q2M3D2 409 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 C11orf91Q3C1V1 193 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 TMEM176BQ3YBM2 270 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 TIGD2Q4W5G0 525 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 PDCD4Q53EL6 469 aaKnown RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 GPAT3Q53EU6 434 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ATAD3BQ5T9A4 648 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 HBMQ6B0K9 141 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR2A2Q6IF42 318 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 EPGNQ6UW88 154 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF550Q7Z398 422 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 MTERF4Q7Z6M4 381 aaKnown RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 KIF18BQ86Y91 864 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF619Q8N2I2 560 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZNF610Q8N9Z0 462 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR5W2Q8NH69 310 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 LRRC8CQ8TDW0 803 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 FAM222BQ8WU58 562 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ROBO4Q8WZ75 1007 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CNOT9Q92600 299 aaKnown RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 OSTF1Q92882 214 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 VPS33AQ96AX1 596 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 DNAJA3Q96EY1 480 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 THOC1Q96FV9 657 aaKnown RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ZBTB18Q99592 522 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 EBF4Q9BQW3 602 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 SRXN1Q9BYN0 137 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 NMUR2Q9GZQ4 415 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 LAT2Q9GZY6 243 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CLEC4MQ9H2X3 399 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ACBD3Q9H3P7 528 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 PIGMQ9H3S5 423 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 COQ10BQ9H8M1 238 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 RASSF1Q9NS23 344 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 EXD2Q9NVH0 621 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 FOXD3Q9UJU5 478 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 MCTS1Q9ULC4 181 aaKnown RBP5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 PROCRQ9UNN8 238 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 C2CD3Q4AC94 2353 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 CADP27708 2225 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 ARID1AO14497 2285 aa5.16□□□□□ -1.58
HMGB1P20-201ENST00000402555 TLN2Q9Y4G6 2542 aa5.15□□□□□ -1.58
HMGB1P20-201ENST00000402555 UQCRHLA0A096LP55 91 aa5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 A0A1W2PPR1 153 aa5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 SH3D21A4FU49 640 aa5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 RFXANKO14593 260 aa5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 AP3D1O14617 1153 aa5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 ADAMDEC1O15204 470 aa5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 POLR3GO15318 223 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 EIF4E2O60573 245 aaKnown RBP5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 ADAM11O75078 769 aa5.15□□□□□ -1.59
HMGB1P20-201ENST00000402555 SS18L1O75177 396 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms