RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 NDNFQ8TB73 568 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 TMEM239Q8WW34 195 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 SDSLQ96GA7 329 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 AP1S3Q96PC3 154 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 MEPEQ9NQ76 525 aaPredicted RBP13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ENPP4Q9Y6X5 453 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 G3V2L1 256 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 IFNA1P01562 189 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ICAM2P13598 275 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF140P52738 457 aaPredicted RBP13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 HTR4Q13639 388 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 PCGF3Q3KNV8 242 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 ESCO2Q56NI9 601 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 MEX3BQ6ZN04 569 aaKnown RBP13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 KIF18BQ86Y91 864 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 PIANPQ8IYJ0 282 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 OR5W2Q8NH69 310 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 MRGPRX1Q96LB2 322 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 DECR2Q9NUI1 292 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 WDR90Q96KV7 1748 aa13.32□□□□□ -0.28
PCDHA11-201ENST00000398640 MYO9BQ13459 2157 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 C12orf71A8MTZ7 269 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 PRRT4C9JH25 899 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 CREBL2O60519 120 aaPredicted RBP13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 ATP6V1G1O75348 118 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 OR8U9P0C7N5 309 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 CAMLGP49069 296 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 ARHGAP19Q14CB8 494 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 C3P1Q6ZMU1 363 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 FBXL6Q8N531 539 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 GOLM1Q8NBJ4 401 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 CCDC74AQ96AQ1 378 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 DPCDQ9BVM2 203 aaPredicted RBP13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF355PQ9NSJ1 428 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 TIMM8AO60220 97 aaPredicted RBP13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 SNAPC5O75971 98 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 RAB3AP20336 220 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 DNASE1P24855 282 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 NCS1P62166 190 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 ADARB1P78563 741 aaKnown RBP13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 MARVELD2Q8N4S9 558 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 SSX3Q99909 188 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 THSD1Q9NS62 852 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 QSER1Q2KHR3 1735 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 AP1G1O43747 822 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 CBX7O95931 251 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 PENKP01210 267 aaPredicted RBP13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 HMGN2P05204 90 aaKnown RBP13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 PRDX3P30048 256 aaKnown RBP13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 TMEM246Q9BRR3 403 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 KLHL13Q9P2N7 655 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 NME4O00746 187 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 ATG12O94817 140 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 MMP12P39900 470 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 GPR150Q8NGU9 434 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 SFXN5Q8TD22 340 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 PINK1Q9BXM7 581 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 C12orf49Q9H741 205 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 CD93Q9NPY3 652 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 B3GNT3Q9Y2A9 372 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 A0A0U1RQK1 487 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 A6NIZ1 184 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 AQP2P41181 271 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 CAV2P51636 162 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 RAP1BP61224 184 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 RAP1AP62834 184 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 COQ5Q5HYK3 327 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 FBXO27Q8NI29 283 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 WFDC5Q8TCV5 224 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 OR5B12Q96R08 314 aa13.31□□□□□ -0.28
PCDHA11-201ENST00000398640 CAV3P56539 151 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 SELENOWP63302 87 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 P2RY14Q15391 338 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF181Q2M3W8 571 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 MOB3CQ70IA8 216 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 TMEM150AQ86TG1 271 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ADIPOR2Q86V24 386 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 PPP1R35Q8TAP8 253 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 TBC1D20Q96BZ9 403 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 SYT3Q9BQG1 590 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 EMC9Q9Y3B6 208 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 PCDHGA7Q9Y5G6 932 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 MROH6A6NGR9 719 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ENSAO43768 121 aaKnown RBP13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 CAPNS1P04632 268 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ZNF14P17017 642 aaPredicted RBP13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ADH6P28332 368 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 KHDC1LQ5JSQ8 128 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 Q6ZS52 159 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 KIAA0907Q7Z7F0 614 aaPredicted RBP13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 VRK2Q86Y07 508 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 SERPINA12Q8IW75 414 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 PLPP6Q8IY26 295 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ESX1Q8N693 406 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 IL17RDQ8NFM7 739 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 ARGFXA6NJG6 315 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 H0YGG7 62 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 MTHFD2P13995 350 aa13.3□□□□□ -0.28
PCDHA11-201ENST00000398640 CCR7P32248 378 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms